Search Java Classes and Packages
# Classes and Interfaces in #ImageJ - 331 results found.
| Name | Description | Type | Package | Framework |
| AboutBox | This plugin implements the Help/About ImageJ command by opening the about. | Class | ij.plugin | ImageJ |
| Analyzer | This plugin implements ImageJ's Analyze/Measure and Analyze/Set Measurements commands. | Class | ij.plugin.filter | ImageJ |
| Animator | This plugin animates stacks. | Class | ij.plugin | ImageJ |
| AppearanceOptions | This plugin implements the Edit/Options/Appearance command. | Class | ij.plugin | ImageJ |
| ArrayUtil | Class | ij.util | ImageJ | |
| Arrow | This is an Roi subclass for creating and displaying arrows. | Class | ij.gui | ImageJ |
| ArrowTool | Class | ij.plugin.tool | ImageJ | |
| ArrowToolOptions | This plugin implements the Edit/Options/Arrow Tool command. | Class | ij.plugin | ImageJ |
| AutoThresholder | Autothresholding methods (limited to 256 bin histograms) from the Auto_Threshold plugin (http://fiji. | Class | ij.process | ImageJ |
| AVI_Reader | ImageJ Plugin for reading an AVI file into an image stack (one slice per video frame) | Class | ij.plugin | ImageJ |
| AVI_Writer | This plugin implements the File/Save As/AVI command. | Class | ij.plugin.filter | ImageJ |
| BackgroundSubtracter | rolling ball algorithm described in Stanley Sternberg's article, "Biomedical ImageProcessing", IEEE Computer, January 1983. | Class | ij.plugin.filter | ImageJ |
| BatchConverter | This plugin implements the File/ /Convert command, which converts the images in a folder to a specified format. | Class | ij.plugin | ImageJ |
| BatchMeasure | This plugin implements the File/Batch/Measure command, which measures all the images in a user-specified folder. | Class | ij.plugin | ImageJ |
| BatchProcessor | This plugin implements the File/Batch/Macro and File/Batch/Virtual Stack commands. | Class | ij.plugin | ImageJ |
| Benchmark | results and additional benchmarks are available at "http://imagej. | Class | ij.plugin.filter | ImageJ |
| Binary | and Fill Holes commands in the Process/Binary submenu. | Class | ij.plugin.filter | ImageJ |
| BinaryInterpolator | Class | ij.process | ImageJ | |
| BinaryProcessor | This class processes binary images. | Class | ij.process | ImageJ |
| Binner | This plugin implements the Image/Transform/Bin command. | Class | ij.plugin | ImageJ |
| BitBuffer | A class for reading arbitrary numbers of bits from a byte array. | Class | ij.io | ImageJ |
| Blitter | ImageJ bit blitting classes must implement this interface. | Interface | ij.process | ImageJ |
| BMP_Reader | This plugin reads BMP files. | Class | ij.plugin | ImageJ |
| BMP_Writer | http://www. | Class | ij.plugin | ImageJ |
| BrowserLauncher | This plugin implements the File/Import/URL command and the commands in the Help menu that open web pages. | Class | ij.plugin | ImageJ |
| BrushTool | Class | ij.plugin.tool | ImageJ | |
| ByteBlitter | This class does bit blitting of byte images. | Class | ij.process | ImageJ |
| ByteProcessor | This is an 8-bit image and methods that operate on that image. | Class | ij.process | ImageJ |
| ByteStatistics | 8-bit image statistics, including histogram. | Class | ij.process | ImageJ |
| Calibration | Calibration objects contain an image's spatial and density calibration data. | Class | ij.measure | ImageJ |
| CalibrationBar | This plugin implements the Analyze/Tools/Calibration Bar command. | Class | ij.plugin | ImageJ |
| Calibrator | Class | ij.plugin.filter | ImageJ | |
| CanvasResizer | This plugin implements the Image/Adjust/Canvas Size command. | Class | ij.plugin | ImageJ |
| ChannelArranger | This plugin implements the Image/Colors/Arrange Channels command, which allows the user to change the order of channels. | Class | ij.plugin | ImageJ |
| Channels | Displays the ImageJ Channels window. | Class | ij.plugin.frame | ImageJ |
| ChannelSplitter | This plugin implements the Image/Color/Split Channels command. | Class | ij.plugin | ImageJ |
| CircularRoiMaker | This class implements the Process/FFT/Make Circular Selection command. | Class | ij.plugin | ImageJ |
| ClassChecker | Checks for duplicate class and JAR files in the plugins folders and deletes older duplicates. | Class | ij.plugin | ImageJ |
| Clipboard | Copies/pastes images to/from the system clipboard. | Class | ij.plugin | ImageJ |
| ColorBlitter | This class does bit blitting of RGB images. | Class | ij.process | ImageJ |
| ColorChooser | Displays a dialog that allows the user to select a color using three sliders. | Class | ij.gui | ImageJ |
| ColorPicker | Class | ij.plugin.frame | ImageJ | |
| ColorProcessor | This is an 32-bit RGB image and methods that operate on that image. | Class | ij.process | ImageJ |
| Colors | This plugin implements most of the Edit/Options/Colors command. | Class | ij.plugin | ImageJ |
| ColorSpaceConverter | Created Jan 15, 2004 Version 3 posted on ImageJ Mar 12, 2006 by Duane Schwartzwald | Class | ij.process | ImageJ |
| ColorStatistics | RGB image statistics, including histogram. | Class | ij.process | ImageJ |
| ColorThresholder | Selects pixels according to hsb or rgb components. | Class | ij.plugin.frame | ImageJ |
| CommandFinder | Class | ij.plugin | ImageJ | |
| CommandListener | Plugins that implement this interface are notified when ImageJ is about to run a menu command. | Interface | ij | ImageJ |
| CommandLister | This class is used by the Plugins/Shortcuts/List Shortcuts command to display a list keyboard shortcuts. | Class | ij.plugin | ImageJ |
| Commands | Runs miscellaneous File and Window menu commands. | Class | ij.plugin | ImageJ |
| Compiler | Compiles and runs plugins using the javac compiler. | Class | ij.plugin | ImageJ |
| CompositeConverter | This plugin implements the Image/Color/Make Composite command. | Class | ij.plugin | ImageJ |
| CompositeImage | Class | ij | ImageJ | |
| Concatenator | This plugin, which concatenates two or more images or stacks, implements the Image/Stacks/Tools/Concatenate command. | Class | ij.plugin | ImageJ |
| ContrastAdjuster | This plugin implements the Brightness/Contrast, Window/level and Color Balance commands, all in the Image/Adjust sub-menu. | Class | ij.plugin.frame | ImageJ |
| ContrastEnhancer | Class | ij.plugin | ImageJ | |
| ControlPanel | This plugin displays a panel with ImageJ commands in a hierarchical tree structure. | Class | ij.plugin | ImageJ |
| Converter | Class | ij.plugin | ImageJ | |
| Convolver | This plugin convolves images using user user defined kernels. | Class | ij.plugin.filter | ImageJ |
| CurveFitter | Curve fitting class based on the Simplex method in the Minimizer class Notes on fitting polynomial functions: | Class | ij.measure | ImageJ |
| Debugger | Interface | ij.macro | ImageJ | |
| DialogListener | PlugIns or PlugInFilters that want to listen to changes in a GenericDialog without adding listeners for each dialog field should implementthis method. | Interface | ij.gui | ImageJ |
| DICOM | This plugin decodes DICOM files. | Class | ij.plugin | ImageJ |
| DicomTools | Class | ij.util | ImageJ | |
| DirectoryChooser | This class displays a dialog box that allows the user can select a directory. | Class | ij.io | ImageJ |
| Distribution | This plugin implements the Analyze/Distribution command. | Class | ij.plugin | ImageJ |
| DownsizeTable | A table for easier downsizing by convolution with a kernel. | Class | ij.process | ImageJ |
| DragAndDrop | This class opens images, roi's, luts and text files dragged and dropped on the "ImageJ" window. | Class | ij.plugin | ImageJ |
| Duplicater | Class | ij.plugin.filter | ImageJ | |
| Duplicator | This plugin implements the Image/Duplicate command. | Class | ij.plugin | ImageJ |
| Editor | This is a simple TextArea based editor for editing and compiling plugins. | Class | ij.plugin.frame | ImageJ |
| EDM | This plugin implements the Euclidean Distance Map (EDM), Watershed, Ultimate Eroded Points and Voronoi commands in the Process/Binary submenu. | Class | ij.plugin.filter | ImageJ |
| EllipseFitter | This class fits an ellipse to an ROI. | Class | ij.process | ImageJ |
| EllipseRoi | Elliptical region of interest. | Class | ij.gui | ImageJ |
| EventListener | This plugin implements the Plugins/Utilities/Monitor Events command. | Class | ij.plugin | ImageJ |
| Executer | Runs ImageJ menu commands in a separate thread. | Class | ij | ImageJ |
| ExtendedPlugInFilter | ImageJ plugins that process an image may implement this interface. | Interface | ij.plugin.filter | ImageJ |
| ExtensionDescriptor | Class | ij.macro | ImageJ | |
| FFT | This class implements the FFT, Inverse FFT and Redisplay Power Spectrum commands in the Process/FFT submenu. | Class | ij.plugin | ImageJ |
| FFTCustomFilter | This class implements the Process/FFT/Custom Filter command. | Class | ij.plugin.filter | ImageJ |
| FFTFilter | This class implements the Process/FFT/Bandpass Filter command. | Class | ij.plugin.filter | ImageJ |
| FFTMath | The class implements the Process/FFT/Math command. | Class | ij.plugin | ImageJ |
| FHT | This class contains a Java implementation of the Fast HartleyTransform. | Class | ij.process | ImageJ |
| FileInfo | This class consists of public fields that describe an image file. | Class | ij.io | ImageJ |
| FileInfoVirtualStack | This plugin opens a multi-page TIFF file as a virtual stack. | Class | ij.plugin | ImageJ |
| FileOpener | Opens or reverts an image specified by a FileInfo object. | Class | ij.io | ImageJ |
| FileSaver | Saves images in tiff, gif, jpeg, raw, zip and text format. | Class | ij.io | ImageJ |
| Filler | This plugin implements ImageJ's Fill, Clear, Clear Outside and Draw commands. | Class | ij.plugin.filter | ImageJ |
| Filters | This plugin implements the Invert, Smooth, Sharpen, Find Edges, and Add Noise commands. | Class | ij.plugin.filter | ImageJ |
| Filters3D | Class | ij.plugin | ImageJ | |
| FITS_Reader | Opens and displays FITS images. | Class | ij.plugin | ImageJ |
| FITS_Writer | This plugin saves a 16 or 32 bit image in FITS format. | Class | ij.plugin | ImageJ |
| Fitter | ImageJ plugin that does curve fitting using the modified CurveFitter class. | Class | ij.plugin.frame | ImageJ |
| FloatBlitter | This class does bit blitting of 32-bit floating-point images. | Class | ij.process | ImageJ |
| FloatPolygon | Used by the Roi classes to return float coordinate arrays and to determine if a point is inside or outside of spline fitted selections. | Class | ij.process | ImageJ |
| FloatProcessor | This is an 32-bit floating-point image and methods that operate on that image. | Class | ij.process | ImageJ |
| FloatStatistics | 32-bit (float) image statistics, including histogram. | Class | ij.process | ImageJ |
| FloodFiller | This class, which does flood filling, is used by the floodFill() macro function and by the particle analyzer | Class | ij.process | ImageJ |
| FolderOpener | opens a folder of images as a stack. | Class | ij.plugin | ImageJ |
| FractalBoxCounter | Calculate the so-called "capacity" fractal dimension. | Class | ij.plugin.filter | ImageJ |
| FreehandRoi | Freehand region of interest or freehand line of interestSee Also:Serialized Form | Class | ij.gui | ImageJ |
| FunctionFinder | This class implements the text editor's Macros/Find Functions command. | Class | ij.macro | ImageJ |
| Functions | This class implements the built-in macro functions. | Class | ij.macro | ImageJ |
| GaussianBlur | This plug-in filter uses convolution with a Gaussian function for smoothing. | Class | ij.plugin.filter | ImageJ |
| GaussianBlur3D | Class | ij.plugin | ImageJ | |
| GelAnalyzer | This plugin generates gel profile plots that can be analyzed usingthe wand tool. | Class | ij.plugin | ImageJ |
| GenericDialog | This class is a customizable modal dialog box. | Class | ij.gui | ImageJ |
| GIF_Reader | This plugin opens GIFs and Animated GIFs. | Class | ij.plugin | ImageJ |
| GifWriter | Class | ij.plugin | ImageJ | |
| Grid | This class implements the Analyze/Tools/Grid command. | Class | ij.plugin | ImageJ |
| GroupedZProjector | This plugin implements the Image/Stacks/Tools/Grouped Z Project command. | Class | ij.plugin | ImageJ |
| GUI | This class consists of static GUI utility methods. | Class | ij.gui | ImageJ |
| Histogram | This plugin implements the Analyze/Histogram command. | Class | ij.plugin | ImageJ |
| HistogramWindow | This class is an extended ImageWindow that displays histograms. | Class | ij.gui | ImageJ |
| Hotkeys | Class | ij.plugin | ImageJ | |
| HTMLDialog | This is modal or non-modal dialog box that displays HTML formated text. | Class | ij.gui | ImageJ |
| HyperStackConverter | and "HyperStack to Stack" commands. | Class | ij.plugin | ImageJ |
| HyperStackMaker | This plugin implements the File/New/Hyperstack command. | Class | ij.plugin | ImageJ |
| HyperStackReducer | Class | ij.plugin | ImageJ | |
| IJ | This class consists of static utility methods. | Class | ij | ImageJ |
| IJEventListener | Plugins that implement this interface are notified when the user changes the foreground color, changes the background color, | Interface | ij | ImageJ |
| ImageCalculator | This plugin implements the Process/Image Calculator command. | Class | ij.plugin | ImageJ |
| ImageCanvas | This is a Canvas used to display images in a Window. | Class | ij.gui | ImageJ |
| ImageConverter | This class converts an ImagePlus object to a different type. | Class | ij.process | ImageJ |
| ImageJ | This frame is the main ImageJ class. | Class | ij | ImageJ |
| ImageJ_Updater | This plugin implements the Help/Update ImageJ command. | Class | ij.plugin | ImageJ |
| ImageJApplet | Runs ImageJ as an applet and optionally opens up to nine images using URLs passed as a parameters. | Class | ij | ImageJ |
| ImageLayout | This is a custom layout manager that supports resizing of zoomedimages. | Class | ij.gui | ImageJ |
| ImageListener | Plugins that implement this interface are notified when an image is opened, closed or updated. | Interface | ij | ImageJ |
| ImageMath | This plugin implements ImageJ's Process/Math submenu. | Class | ij.plugin.filter | ImageJ |
| ImagePanel | This class is used by GenericDialog to add images to dialogs. | Class | ij.gui | ImageJ |
| ImagePlus | An ImagePlus contain an ImageProcessor (2D image) or an ImageStack (3D, 4D or 5D image). | Class | ij | ImageJ |
| ImageProcessor | This abstract class is the superclass for classes that processthe four data types (byte, short, float and RGB) supported by ImageJ. | Class | ij.process | ImageJ |
| ImageProperties | Class | ij.plugin.filter | ImageJ | |
| ImageReader | Reads raw 8-bit, 16-bit or 32-bit (float or RGB) images from a stream or URL. | Class | ij.io | ImageJ |
| ImageRoi | An ImageRoi is an Roi that overlays an image. | Class | ij.gui | ImageJ |
| ImageStack | This class represents an expandable array of images. | Class | ij | ImageJ |
| ImageStatistics | Statistics, including the histogram, of an image or selection. | Class | ij.process | ImageJ |
| ImagesToStack | Class | ij.plugin | ImageJ | |
| ImageWindow | A frame for displaying images. | Class | ij.gui | ImageJ |
| ImageWriter | Writes a raw image described by a FileInfo object to an OutputStream. | Class | ij.io | ImageJ |
| ImportDialog | This is a dialog box used to imports raw 8, 16, 24 and 32-bit images. | Class | ij.io | ImageJ |
| Info | This plugin implements the Image/Show Info command. | Class | ij.plugin.filter | ImageJ |
| Interpreter | This is the recursive descent parser/interpreter for the ImageJ macro language. | Class | ij.macro | ImageJ |
| Java2 | This class contains static methods that use the Java 2 API. | Class | ij.util | ImageJ |
| JavaProperties | Displays the Java system properties in a text window. | Class | ij.plugin | ImageJ |
| JavaScriptEvaluator | on systems running Java 1. | Class | ij.plugin | ImageJ |
| JpegWriter | The File/Save As/Jpeg command (FileSaver. | Class | ij.plugin | ImageJ |
| Line | This class represents a straight line selection. | Class | ij.gui | ImageJ |
| LineGraphAnalyzer | Class | ij.plugin.filter | ImageJ | |
| LineWidthAdjuster | Adjusts the width of line selections. | Class | ij.plugin.frame | ImageJ |
| ListVirtualStack | This plugin opens images specified by list of file paths as a virtual stack. | Class | ij.plugin | ImageJ |
| LogStream | This class provides the functionality to divert output sent to the System. | Class | ij.io | ImageJ |
| LookUpTable | This class represents a color look-up table. | Class | ij | ImageJ |
| LUT | This is an indexed color model that allows an lower and upper bound to be specified. | Class | ij.process | ImageJ |
| LUT_Editor | Class | ij.plugin | ImageJ | |
| LutApplier | This plugin implements the Image/Lookup Tables/Apply LUT command. | Class | ij.plugin.filter | ImageJ |
| LutLoader | Opens NIH Image look-up tables (LUTs), 768 byte binary LUTs (256 reds, 256 greens and 256 blues), LUTs in text format, | Class | ij.plugin | ImageJ |
| LutViewer | Displays the active image's look-up table. | Class | ij.plugin.filter | ImageJ |
| Macro | The class contains static methods that perform macro operations. | Class | ij | ImageJ |
| Macro_Runner | This class runs macros and scripts installed in the Plugins menu as well as macros and scripts opened using the Plugins/Macros/Run command. | Class | ij.plugin | ImageJ |
| MacroConstants | Interface | ij.macro | ImageJ | |
| MacroExtension | Interface | ij.macro | ImageJ | |
| MacroInstaller | This plugin implements the Plugins/Macros/Install Macros command. | Class | ij.plugin | ImageJ |
| MacroRunner | This class runs macros in a separate thread. | Class | ij.macro | ImageJ |
| MacroToolRunner | Class | ij.plugin.tool | ImageJ | |
| MaximumFinder | This ImageJ plug-in filter finds the maxima (or minima) of an image. | Class | ij.plugin.filter | ImageJ |
| Measurements | Interface | ij.measure | ImageJ | |
| MeasurementsWriter | Writes measurements to a csv or tab-delimited text file. | Class | ij.plugin | ImageJ |
| MedianCut | Converts an RGB image to 8-bit index color using Heckbert's median-cut color quantization algorithm. | Class | ij.process | ImageJ |
| Memory | This plugin implements the Edit/Options/Memory command. | Class | ij.plugin | ImageJ |
| MemoryMonitor | This plugin continuously plots ImageJ's memory utilization. | Class | ij.plugin.frame | ImageJ |
| Menus | This class installs and updates ImageJ's menus. | Class | ij | ImageJ |
| MessageDialog | A modal dialog box that displays information. | Class | ij.gui | ImageJ |
| Minimizer | Minimizer based on Nelder-Mead simplex method (also known as polytope method), including the 'outside contraction' as described in: | Class | ij.measure | ImageJ |
| MontageMaker | Class | ij.plugin | ImageJ | |
| MultiLineLabel | Custom component for displaying multiple lines. | Class | ij.gui | ImageJ |
| NewImage | New image dialog box plus several static utility methods for creating images. | Class | ij.gui | ImageJ |
| NewPlugin | This class creates a new macro or the Java source for a new plugin. | Class | ij.plugin | ImageJ |
| NextImageOpener | Class | ij.plugin | ImageJ | |
| NonBlockingGenericDialog | This is an extension of GenericDialog that is non-model. | Class | ij.gui | ImageJ |
| OpenDialog | This class displays a dialog window from which the user can select an input file. | Class | ij.io | ImageJ |
| Opener | Opens tiff (and tiff stacks), dicom, fits, pgm, jpeg, bmp or gif images, and look-up tables, using a file open dialog or a path. | Class | ij.io | ImageJ |
| Options | This plugin implements most of the commands in the Edit/Options sub-menu. | Class | ij.plugin | ImageJ |
| Orthogonal_Views | This plugin projects dynamically orthogonal XZ and YZ views of a stack. | Class | ij.plugin | ImageJ |
| OtherInstance | Class | ij | ImageJ | |
| OvalRoi | Oval region of interestSee Also:Serialized Form | Class | ij.gui | ImageJ |
| Overlay | An Overlay is a list of ROIs that can be drawn non-destructively on an Image. | Class | ij.gui | ImageJ |
| OverlayBrushTool | Class | ij.plugin.tool | ImageJ | |
| OverlayCommands | This plugin implements the commands in the Image/Overlay menu. | Class | ij.plugin | ImageJ |
| OverlayLabels | This plugin implements the Image/Overlay/Labels command. | Class | ij.plugin | ImageJ |
| ParticleAnalyzer | for each line do for each pixel in this line do | Class | ij.plugin.filter | ImageJ |
| PasteController | Class | ij.plugin.frame | ImageJ | |
| PGM_Reader | This plugin opens PxM format images. | Class | ij.plugin | ImageJ |
| PixelInspectionTool | This plugin continuously displays the pixel values of the cursor and its surroundings. | Class | ij.plugin.tool | ImageJ |
| Plot | This class creates an image that line graphs, scatter plots and plots of vector fields (arrows) can be drawn on and displayed. | Class | ij.gui | ImageJ |
| PlotCanvas | This subclass of ImageCanvas has special provisions for plots: - Zooming: sets the plot range | Class | ij.gui | ImageJ |
| PlotDialog | Class | ij.gui | ImageJ | |
| PlotMaker | Plugins that generate "Live" profile plots (Profiler and ZAxisProfiler) displayed in PlotWindows implement this interface. | Interface | ij.gui | ImageJ |
| PlotWindow | This class implements the Analyze/Plot Profile command. | Class | ij.gui | ImageJ |
| PlugIn | Plugins that acquire images or display windows should implement this interface. | Interface | ij.plugin | ImageJ |
| PluginClassLoader | ImageJ uses this class loader to load plugins and resources from the plugins directory and immediate subdirectories. | Class | ij.io | ImageJ |
| PlugInDialog | This is a non-modal dialog that plugins can extend. | Class | ij.plugin.frame | ImageJ |
| PlugInFilter | ImageJ plugins that process an image should implement this interface. | Interface | ij.plugin.filter | ImageJ |
| PlugInFilterRunner | Class | ij.plugin.filter | ImageJ | |
| PlugInFrame | This is a closeable window that plugins can extend. | Class | ij.plugin.frame | ImageJ |
| PluginInstaller | Installs plugins dragged and dropped on the "ImageJ" window, or plugins, macros or scripts opened using the Plugins/Install command. | Class | ij.plugin | ImageJ |
| PlugInInterpreter | Plugins that run scripts (e. | Class | ij.plugin | ImageJ |
| PlugInTool | Class | ij.plugin.tool | ImageJ | |
| PNG_Writer | Saves in PNG format using the ImageIO classes. | Class | ij.plugin | ImageJ |
| PNM_Writer | Class | ij.plugin | ImageJ | |
| PointRoi | This class represents a collection of points. | Class | ij.gui | ImageJ |
| PointToolOptions | This plugin implements the Edit/Options/Point Tool command. | Class | ij.plugin | ImageJ |
| PolygonFiller | This class fills polygons using the scan-line filling algorithm described at "http://www. | Class | ij.process | ImageJ |
| PolygonRoi | This class represents a polygon region of interest or polyline of interest. | Class | ij.gui | ImageJ |
| Prefs | This class contains the ImageJ preferences, which are loaded from the "IJ_Props. | Class | ij | ImageJ |
| Printer | This plugin implements the File/Page Setup and File/Print commands. | Class | ij.plugin.filter | ImageJ |
| ProfilePlot | Creates a density profile plot of a rectangular selection or line selection. | Class | ij.gui | ImageJ |
| Profiler | Class | ij.plugin | ImageJ | |
| Program | An object of this type is a tokenized macro file and the associated symbol table. | Class | ij.macro | ImageJ |
| ProgressBar | This is the progress bar that is displayed in the lower right hand corner of the ImageJ window. | Class | ij.gui | ImageJ |
| Projector | This plugin creates a sequence of projections of a rotating volume (stack of slices) onto a plane usingnearest-point (surface), brightest-point, or mean-value projection or a weighted combination of nearest- | Class | ij.plugin | ImageJ |
| ProxySettings | This plugin implements the Plugins/Utilities/Proxy Settings command. | Class | ij.plugin | ImageJ |
| RandomAccessStream | This class uses a memory cache to allow seeking within an InputStream. | Class | ij.io | ImageJ |
| RankFilters | This plugin implements the Mean, Minimum, Maximum, Variance, Median, Open Maxima, Close Maxima, Remove Outliers, Remove NaNs and Despeckle commands. | Class | ij.plugin.filter | ImageJ |
| Raw | This plugin implements the File/Import/Raw command. | Class | ij.plugin | ImageJ |
| RecentOpener | Opens, in a separate thread, files selected from the File/Open Recent submenu. | Class | ij | ImageJ |
| Recorder | This is ImageJ's macro recorder. | Class | ij.plugin.frame | ImageJ |
| RectToolOptions | This plugin implements the rounded rectangle tool dialog box. | Class | ij.plugin | ImageJ |
| Resizer | This plugin implements the Edit/Crop and Image/Adjust/Size commands. | Class | ij.plugin | ImageJ |
| ResultsSorter | This plugin implements the Results Table's Sort command. | Class | ij.plugin | ImageJ |
| ResultsTable | This is a table for storing measurement results and strings as columns of values. | Class | ij.measure | ImageJ |
| RGBStackConverter | Converts a 2 or 3 slice stack, or a hyperstack, to RGB. | Class | ij.plugin | ImageJ |
| RGBStackMerge | This plugin implements the Image/Color/Merge Channels command. | Class | ij.plugin | ImageJ |
| RGBStackSplitter | Deprecated; replaced by ij. | Class | ij.plugin.filter | ImageJ |
| Roi | A rectangular region of interest and superclass for the other ROI classes. | Class | ij.gui | ImageJ |
| RoiDecoder | Decodes an ImageJ, NIH Image or Scion Image ROI file. | Class | ij.io | ImageJ |
| RoiEncoder | Saves an ROI to a file or stream. | Class | ij.io | ImageJ |
| RoiEnlarger | This plugin, which enlarges or shrinks selections, implements the Edit/Selection/Enlarge command. | Class | ij.plugin | ImageJ |
| RoiInterpolator | This class interpolates between ROIs in the ROI Manager. | Class | ij.plugin | ImageJ |
| RoiListener | Plugins that implement this interface are notified when an ROI is created, modified or deleted. | Interface | ij.gui | ImageJ |
| RoiManager | This plugin implements the Analyze/Tools/ROI Manager command. | Class | ij.plugin.frame | ImageJ |
| RoiProperties | Displays a dialog that allows the user to specify ROI properties such as color and line width. | Class | ij.gui | ImageJ |
| RoiReader | Opens ImageJ, NIH Image and Scion Image for windows ROI outlines. | Class | ij.plugin | ImageJ |
| RoiRotationTool | Class | ij.plugin.tool | ImageJ | |
| RoiRotator | This plugin implements the Edit/Selection/Rotate command. | Class | ij.plugin | ImageJ |
| RoiScaler | This plugin implements the Edit/Selection/Scale command. | Class | ij.plugin | ImageJ |
| RoiWriter | Saves the current ROI outline to a file. | Class | ij.plugin.filter | ImageJ |
| Rotator | This plugin implements the Image/Rotate/Arbitrarily command. | Class | ij.plugin.filter | ImageJ |
| SaltAndPepper | Class | ij.plugin.filter | ImageJ | |
| SaveChangesDialog | A modal dialog box with a one line message and "Don't Save", "Cancel" and "Save" buttons. | Class | ij.gui | ImageJ |
| SaveDialog | This class displays a dialog window from which the user can save a file. | Class | ij.io | ImageJ |
| ScaleBar | This plugin implements the Analyze/Tools/Draw Scale Bar command. | Class | ij.plugin | ImageJ |
| ScaleDialog | Class | ij.plugin.filter | ImageJ | |
| Scaler | This plugin implements the Image/Scale command. | Class | ij.plugin | ImageJ |
| ScreenGrabber | This plugin implements the Plugins/Utilities/Capture Screen and Plugins/Utilities/Capture Image commands. | Class | ij.plugin | ImageJ |
| ScrollbarWithLabel | This class, based on Joachim Walter's Image5D package, adds "c", "z" labels and play-pause icons (T) to the stack and hyperstacks dimension sliders. | Class | ij.gui | ImageJ |
| Selection | This plugin implements the commands in the Edit/Section submenu. | Class | ij.plugin | ImageJ |
| Shadows | Class | ij.plugin.filter | ImageJ | |
| ShapeRoi | A subclass of ij. | Class | ij.gui | ImageJ |
| ShortBlitter | This class does bit blitting of 16-bit images. | Class | ij.process | ImageJ |
| ShortProcessor | ShortProcessors contain a 16-bit unsigned image and methods that operate on that image. | Class | ij.process | ImageJ |
| ShortStatistics | 16-bit image statistics, including histogram. | Class | ij.process | ImageJ |
| SimpleCommands | This plugin implements the Plugins/Utilities/Unlock, Image/Rename and Plugins/Utilities/Search commands. | Class | ij.plugin | ImageJ |
| Slicer | for FREELINE or POLYLINE ROI, spatial calibration is ignored: the image is sampled at constant _pixel_ increments (distance 1), so | Class | ij.plugin | ImageJ |
| SpecifyROI | This plugin implements the Edit/Selection/Specify command. | Class | ij.plugin | ImageJ |
| SplineFitter | This class fits a spline function to a set of points. | Class | ij.measure | ImageJ |
| Stack_Statistics | This plugin implements the Image/Stacks/Statistics command. | Class | ij.plugin | ImageJ |
| StackCombiner | This plugin implements the Image/Stacks/Combine command. | Class | ij.plugin | ImageJ |
| StackConverter | This class does stack type conversions. | Class | ij.process | ImageJ |
| StackEditor | Class | ij.plugin | ImageJ | |
| StackInserter | This plugin, which implements the Image/Stacks/Tools/Insert command, inserts an image or stack into another image or stack. | Class | ij.plugin | ImageJ |
| StackLabeler | This plugin implements the Image/Stacks/Label command. | Class | ij.plugin.filter | ImageJ |
| StackMaker | The plugin implements the Image/Stacks/Tools/Montage to Stack command. | Class | ij.plugin | ImageJ |
| StackProcessor | This class processes stacks. | Class | ij.process | ImageJ |
| StackReducer | This plugin implements the Image/Stacks/Tools/Reduce command. | Class | ij.plugin | ImageJ |
| StackReverser | This plugin implements the Image/Transform/Flip Z and Image/Stacks/Tools/Reverse commands. | Class | ij.plugin | ImageJ |
| StackStatistics | Statistics, including the histogram, of a stack. | Class | ij.process | ImageJ |
| StackWindow | This class is an extended ImageWindow that displays stacks and hyperstacks. | Class | ij.gui | ImageJ |
| StackWriter | This plugin, which saves the images in a stack as separate files, implements the File/Save As/Image Sequence command. | Class | ij.plugin | ImageJ |
| Startup | This plugin implements the Edit/Options/Startup command. | Class | ij.plugin | ImageJ |
| Straightener | This plugin implements the Edit/Selection/Straighten command. | Class | ij.plugin | ImageJ |
| StringSorter | A simple QuickSort for String arrays. | Class | ij.util | ImageJ |
| SubHyperstackMaker | This plugin is used by the Image/Stacks/Tools/Make Substack command to create substacks of hyperstacks. | Class | ij.plugin | ImageJ |
| SubstackMaker | This plugin implements the Image/Stacks/Tools/Make Substack command. | Class | ij.plugin | ImageJ |
| SurfacePlotter | Class | ij.plugin | ImageJ | |
| Symbol | Objects of this class are used as entries in the macro language symbol table. | Class | ij.macro | ImageJ |
| SyncWindows | This class "synchronizes" mouse input in multiple windows. | Class | ij.plugin.frame | ImageJ |
| Text | This plugin implements the Edit/Options/Fonts command and the dialog displayed when you double click on the text tool. | Class | ij.plugin | ImageJ |
| TextEncoder | Saves an image described by an ImageProcessor object as a tab-delimited text file. | Class | ij.io | ImageJ |
| TextFileReader | This plugin displays the contents of a text file in a window. | Class | ij.plugin | ImageJ |
| TextPanel | This is an unlimited size text panel with tab-delimited,labeled and resizable columns. | Class | ij.text | ImageJ |
| TextReader | This plugin opens a tab or comma delimeted text file as an image. | Class | ij.plugin | ImageJ |
| TextRoi | This class is a rectangular ROI containing text. | Class | ij.gui | ImageJ |
| TextWindow | Uses a TextPanel to displays text in a window. | Class | ij.text | ImageJ |
| TextWriter | This plugin implements the File/Save As/Text command, which saves the contents of Editor windows and TextWindows (e. | Class | ij.plugin | ImageJ |
| ThreadLister | Displays thread information in a text window. | Class | ij.plugin | ImageJ |
| ThreadUtil | Class | ij.util | ImageJ | |
| ThresholdAdjuster | Adjusts the lower and upper threshold levels of the active image. | Class | ij.plugin.frame | ImageJ |
| Thresholder | This plugin implements the Process/Binary/Make Binary and Convert to Mask commands. | Class | ij.plugin | ImageJ |
| ThresholdToSelection | Class | ij.plugin.filter | ImageJ | |
| TiffDecoder | Decodes single and multi-image TIFF files. | Class | ij.io | ImageJ |
| TiffEncoder | Saves an image described by a FileInfo object as an uncompressed, big-endian TIFF file. | Class | ij.io | ImageJ |
| Timer | ImageJ plugin for measuring the speed of various Java operations. | Class | ij.plugin | ImageJ |
| Tokenizer | This class converts an imageJ macro file file into a token stream. | Class | ij.macro | ImageJ |
| Toolbar | Class | ij.gui | ImageJ | |
| Tools | This class contains static utility methods. | Class | ij.util | ImageJ |
| Transformer | Class | ij.plugin.filter | ImageJ | |
| Translator | This plugin implements the Image/Translate command. | Class | ij.plugin.filter | ImageJ |
| TrimmedButton | This is an extended Button class used to reduce the width of the HUGE buttons on Mac OS X. | Class | ij.gui | ImageJ |
| TypeConverter | This class converts an ImageProcessor to another data type. | Class | ij.process | ImageJ |
| Undo | This class consists of static methods and fields that implement ImageJ's Undo command. | Class | ij | ImageJ |
| UnsharpMask | This plugin-filter implements ImageJ's Unsharp Mask command. | Class | ij.plugin.filter | ImageJ |
| URLOpener | Opens TIFFs, ZIP compressed TIFFs, DICOMs, GIFs and JPEGs using a URL. | Class | ij.plugin | ImageJ |
| UserFunction | A plugin should implement this interface for minimizing a single-valued function or fitting a curve with a custom fit function. | Interface | ij.measure | ImageJ |
| VirtualStack | This class represents an array of disk-resident images. | Class | ij | ImageJ |
| WaitForUserDialog | This is a non-modal dialog box used to ask the user to perform some task while a macro or plugin is running. | Class | ij.gui | ImageJ |
| Wand | This class implements ImageJ's wand (tracing) tool. | Class | ij.gui | ImageJ |
| WandToolOptions | This plugin implements the Edit/Options/Wand Tool command. | Class | ij.plugin | ImageJ |
| WildcardMatch | This class allows for simple wildcard pattern matching. | Class | ij.util | ImageJ |
| WindowManager | This class consists of static methods used to manage ImageJ's windows. | Class | ij | ImageJ |
| WindowOrganizer | This class implements the Window menu's "Show All", "Main Window", "Cascade" and "Tile" commands. | Class | ij.plugin | ImageJ |
| Writer | This plugin saves an image in tiff, gif, jpeg, bmp, png, text or raw format. | Class | ij.plugin.filter | ImageJ |
| XY_Reader | This plugin implements the File/Import/XY Coordinates command. | Class | ij.plugin | ImageJ |
| XYCoordinates | Writes the XY coordinates and pixel values of all non-background pixels to a tab-delimited text file. | Class | ij.plugin | ImageJ |
| XYWriter | Saves the XY coordinates of the current ROI boundary. | Class | ij.plugin.filter | ImageJ |
| YesNoCancelDialog | A modal dialog box with a one line message and "Yes", "No" and "Cancel" buttons. | Class | ij.gui | ImageJ |
| ZAxisProfiler | Class | ij.plugin | ImageJ | |
| Zoom | This plugin implements the commands in the Image/Zoom submenu. | Class | ij.plugin | ImageJ |
| ZProjector | This plugin performs a z-projection of the input stack. | Class | ij.plugin | ImageJ |