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# Classes and Interfaces in #ImageJ - 331 results found.
NameDescriptionTypePackageFrameworkJavaDoc
AboutBoxThis plugin implements the Help/About ImageJ command by opening the about.Classij.pluginImageJjavadoc
AnalyzerThis plugin implements ImageJ's Analyze/Measure and Analyze/Set Measurements commands.Classij.plugin.filterImageJjavadoc
AnimatorThis plugin animates stacks.Classij.pluginImageJjavadoc
AppearanceOptionsThis plugin implements the Edit/Options/Appearance command.Classij.pluginImageJjavadoc
ArrayUtilClassij.utilImageJjavadoc
ArrowThis is an Roi subclass for creating and displaying arrows.Classij.guiImageJjavadoc
ArrowToolClassij.plugin.toolImageJjavadoc
ArrowToolOptionsThis plugin implements the Edit/Options/Arrow Tool command.Classij.pluginImageJjavadoc
AutoThresholderAutothresholding methods (limited to 256 bin histograms) from the Auto_Threshold plugin (http://fiji.Classij.processImageJjavadoc
AVI_Reader ImageJ Plugin for reading an AVI file into an image stack (one slice per video frame)Classij.pluginImageJjavadoc
AVI_WriterThis plugin implements the File/Save As/AVI command.Classij.plugin.filterImageJjavadoc
BackgroundSubtracterrolling ball algorithm described in Stanley Sternberg's article, "Biomedical ImageProcessing", IEEE Computer, January 1983.Classij.plugin.filterImageJjavadoc
BatchConverterThis plugin implements the File/ /Convert command, which converts the images in a folder to a specified format.Classij.pluginImageJjavadoc
BatchMeasureThis plugin implements the File/Batch/Measure command, which measures all the images in a user-specified folder.Classij.pluginImageJjavadoc
BatchProcessorThis plugin implements the File/Batch/Macro and File/Batch/Virtual Stack commands.Classij.pluginImageJjavadoc
Benchmark results and additional benchmarks are available at "http://imagej.Classij.plugin.filterImageJjavadoc
Binary and Fill Holes commands in the Process/Binary submenu.Classij.plugin.filterImageJjavadoc
BinaryInterpolatorClassij.processImageJjavadoc
BinaryProcessorThis class processes binary images.Classij.processImageJjavadoc
BinnerThis plugin implements the Image/Transform/Bin command.Classij.pluginImageJjavadoc
BitBufferA class for reading arbitrary numbers of bits from a byte array.Classij.ioImageJjavadoc
BlitterImageJ bit blitting classes must implement this interface.Interfaceij.processImageJjavadoc
BMP_ReaderThis plugin reads BMP files.Classij.pluginImageJjavadoc
BMP_Writer http://www.Classij.pluginImageJjavadoc

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BrowserLauncherThis plugin implements the File/Import/URL command and the commands in the Help menu that open web pages.Classij.pluginImageJjavadoc
BrushToolClassij.plugin.toolImageJjavadoc
ByteBlitterThis class does bit blitting of byte images.Classij.processImageJjavadoc
ByteProcessorThis is an 8-bit image and methods that operate on that image.Classij.processImageJjavadoc
ByteStatistics8-bit image statistics, including histogram.Classij.processImageJjavadoc
CalibrationCalibration objects contain an image's spatial and density calibration data.Classij.measureImageJjavadoc
CalibrationBarThis plugin implements the Analyze/Tools/Calibration Bar command.Classij.pluginImageJjavadoc
CalibratorClassij.plugin.filterImageJjavadoc
CanvasResizerThis plugin implements the Image/Adjust/Canvas Size command.Classij.pluginImageJjavadoc
ChannelArrangerThis plugin implements the Image/Colors/Arrange Channels command, which allows the user to change the order of channels.Classij.pluginImageJjavadoc
ChannelsDisplays the ImageJ Channels window.Classij.plugin.frameImageJjavadoc
ChannelSplitterThis plugin implements the Image/Color/Split Channels command.Classij.pluginImageJjavadoc
CircularRoiMakerThis class implements the Process/FFT/Make Circular Selection command.Classij.pluginImageJjavadoc
ClassCheckerChecks for duplicate class and JAR files in the plugins folders and deletes older duplicates.Classij.pluginImageJjavadoc
ClipboardCopies/pastes images to/from the system clipboard.Classij.pluginImageJjavadoc
ColorBlitterThis class does bit blitting of RGB images.Classij.processImageJjavadoc
ColorChooserDisplays a dialog that allows the user to select a color using three sliders.Classij.guiImageJjavadoc
ColorPickerClassij.plugin.frameImageJjavadoc
ColorProcessorThis is an 32-bit RGB image and methods that operate on that image.Classij.processImageJjavadoc
ColorsThis plugin implements most of the Edit/Options/Colors command.Classij.pluginImageJjavadoc
ColorSpaceConverter Created Jan 15, 2004 Version 3 posted on ImageJ Mar 12, 2006 by Duane SchwartzwaldClassij.processImageJjavadoc
ColorStatisticsRGB image statistics, including histogram.Classij.processImageJjavadoc
ColorThresholderSelects pixels according to hsb or rgb components.Classij.plugin.frameImageJjavadoc
CommandFinderClassij.pluginImageJjavadoc
CommandListenerPlugins that implement this interface are notified when ImageJ is about to run a menu command.InterfaceijImageJjavadoc

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CommandListerThis class is used by the Plugins/Shortcuts/List Shortcuts command to display a list keyboard shortcuts.Classij.pluginImageJjavadoc
CommandsRuns miscellaneous File and Window menu commands.Classij.pluginImageJjavadoc
CompilerCompiles and runs plugins using the javac compiler.Classij.pluginImageJjavadoc
CompositeConverterThis plugin implements the Image/Color/Make Composite command.Classij.pluginImageJjavadoc
CompositeImageClassijImageJjavadoc
ConcatenatorThis plugin, which concatenates two or more images or stacks, implements the Image/Stacks/Tools/Concatenate command.Classij.pluginImageJjavadoc
ContrastAdjusterThis plugin implements the Brightness/Contrast, Window/level and Color Balance commands, all in the Image/Adjust sub-menu.Classij.plugin.frameImageJjavadoc
ContrastEnhancerClassij.pluginImageJjavadoc
ControlPanel This plugin displays a panel with ImageJ commands in a hierarchical tree structure.Classij.pluginImageJjavadoc
ConverterClassij.pluginImageJjavadoc
ConvolverThis plugin convolves images using user user defined kernels.Classij.plugin.filterImageJjavadoc
CurveFitterCurve fitting class based on the Simplex method in the Minimizer class Notes on fitting polynomial functions:Classij.measureImageJjavadoc
DebuggerInterfaceij.macroImageJjavadoc
DialogListenerPlugIns or PlugInFilters that want to listen to changes in a GenericDialog without adding listeners for each dialog field should implementthis method.Interfaceij.guiImageJjavadoc
DICOMThis plugin decodes DICOM files.Classij.pluginImageJjavadoc
DicomToolsClassij.utilImageJjavadoc
DirectoryChooserThis class displays a dialog box that allows the user can select a directory.Classij.ioImageJjavadoc
DistributionThis plugin implements the Analyze/Distribution command.Classij.pluginImageJjavadoc
DownsizeTableA table for easier downsizing by convolution with a kernel.Classij.processImageJjavadoc
DragAndDropThis class opens images, roi's, luts and text files dragged and dropped on the "ImageJ" window.Classij.pluginImageJjavadoc
DuplicaterClassij.plugin.filterImageJjavadoc
DuplicatorThis plugin implements the Image/Duplicate command.Classij.pluginImageJjavadoc
EditorThis is a simple TextArea based editor for editing and compiling plugins.Classij.plugin.frameImageJjavadoc
EDMThis plugin implements the Euclidean Distance Map (EDM), Watershed, Ultimate Eroded Points and Voronoi commands in the Process/Binary submenu.Classij.plugin.filterImageJjavadoc
EllipseFitterThis class fits an ellipse to an ROI.Classij.processImageJjavadoc

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EllipseRoiElliptical region of interest.Classij.guiImageJjavadoc
EventListenerThis plugin implements the Plugins/Utilities/Monitor Events command.Classij.pluginImageJjavadoc
ExecuterRuns ImageJ menu commands in a separate thread.ClassijImageJjavadoc
ExtendedPlugInFilterImageJ plugins that process an image may implement this interface.Interfaceij.plugin.filterImageJjavadoc
ExtensionDescriptorClassij.macroImageJjavadoc
FFTThis class implements the FFT, Inverse FFT and Redisplay Power Spectrum commands in the Process/FFT submenu.Classij.pluginImageJjavadoc
FFTCustomFilterThis class implements the Process/FFT/Custom Filter command.Classij.plugin.filterImageJjavadoc
FFTFilterThis class implements the Process/FFT/Bandpass Filter command.Classij.plugin.filterImageJjavadoc
FFTMathThe class implements the Process/FFT/Math command.Classij.pluginImageJjavadoc
FHTThis class contains a Java implementation of the Fast HartleyTransform.Classij.processImageJjavadoc
FileInfoThis class consists of public fields that describe an image file.Classij.ioImageJjavadoc
FileInfoVirtualStackThis plugin opens a multi-page TIFF file as a virtual stack.Classij.pluginImageJjavadoc
FileOpenerOpens or reverts an image specified by a FileInfo object.Classij.ioImageJjavadoc
FileSaverSaves images in tiff, gif, jpeg, raw, zip and text format.Classij.ioImageJjavadoc
FillerThis plugin implements ImageJ's Fill, Clear, Clear Outside and Draw commands.Classij.plugin.filterImageJjavadoc
FiltersThis plugin implements the Invert, Smooth, Sharpen, Find Edges, and Add Noise commands.Classij.plugin.filterImageJjavadoc
Filters3DClassij.pluginImageJjavadoc
FITS_ReaderOpens and displays FITS images.Classij.pluginImageJjavadoc
FITS_WriterThis plugin saves a 16 or 32 bit image in FITS format.Classij.pluginImageJjavadoc
FitterImageJ plugin that does curve fitting using the modified CurveFitter class.Classij.plugin.frameImageJjavadoc
FloatBlitterThis class does bit blitting of 32-bit floating-point images.Classij.processImageJjavadoc
FloatPolygonUsed by the Roi classes to return float coordinate arrays and to determine if a point is inside or outside of spline fitted selections.Classij.processImageJjavadoc
FloatProcessorThis is an 32-bit floating-point image and methods that operate on that image.Classij.processImageJjavadoc
FloatStatistics32-bit (float) image statistics, including histogram.Classij.processImageJjavadoc
FloodFillerThis class, which does flood filling, is used by the floodFill() macro function and by the particle analyzerClassij.processImageJjavadoc

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FolderOpener opens a folder of images as a stack.Classij.pluginImageJjavadoc
FractalBoxCounterCalculate the so-called "capacity" fractal dimension.Classij.plugin.filterImageJjavadoc
FreehandRoiFreehand region of interest or freehand line of interestSee Also:Serialized FormClassij.guiImageJjavadoc
FunctionFinderThis class implements the text editor's Macros/Find Functions command.Classij.macroImageJjavadoc
FunctionsThis class implements the built-in macro functions.Classij.macroImageJjavadoc
GaussianBlurThis plug-in filter uses convolution with a Gaussian function for smoothing.Classij.plugin.filterImageJjavadoc
GaussianBlur3DClassij.pluginImageJjavadoc
GelAnalyzerThis plugin generates gel profile plots that can be analyzed usingthe wand tool.Classij.pluginImageJjavadoc
GenericDialogThis class is a customizable modal dialog box.Classij.guiImageJjavadoc
GIF_ReaderThis plugin opens GIFs and Animated GIFs.Classij.pluginImageJjavadoc
GifWriterClassij.pluginImageJjavadoc
GridThis class implements the Analyze/Tools/Grid command.Classij.pluginImageJjavadoc
GroupedZProjectorThis plugin implements the Image/Stacks/Tools/Grouped Z Project command.Classij.pluginImageJjavadoc
GUIThis class consists of static GUI utility methods.Classij.guiImageJjavadoc
HistogramThis plugin implements the Analyze/Histogram command.Classij.pluginImageJjavadoc
HistogramWindowThis class is an extended ImageWindow that displays histograms.Classij.guiImageJjavadoc
HotkeysClassij.pluginImageJjavadoc
HTMLDialogThis is modal or non-modal dialog box that displays HTML formated text.Classij.guiImageJjavadoc
HyperStackConverter and "HyperStack to Stack" commands.Classij.pluginImageJjavadoc
HyperStackMakerThis plugin implements the File/New/Hyperstack command.Classij.pluginImageJjavadoc
HyperStackReducerClassij.pluginImageJjavadoc
IJThis class consists of static utility methods.ClassijImageJjavadoc
Check Code Snippets / Samples for ij.IJ
IJEventListenerPlugins that implement this interface are notified when the user changes the foreground color, changes the background color,InterfaceijImageJjavadoc
ImageCalculatorThis plugin implements the Process/Image Calculator command.Classij.pluginImageJjavadoc
ImageCanvasThis is a Canvas used to display images in a Window.Classij.guiImageJjavadoc

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ImageConverterThis class converts an ImagePlus object to a different type.Classij.processImageJjavadoc
ImageJThis frame is the main ImageJ class.ClassijImageJjavadoc
ImageJ_UpdaterThis plugin implements the Help/Update ImageJ command.Classij.pluginImageJjavadoc
ImageJAppletRuns ImageJ as an applet and optionally opens up to nine images using URLs passed as a parameters.ClassijImageJjavadoc
ImageLayoutThis is a custom layout manager that supports resizing of zoomedimages.Classij.guiImageJjavadoc
ImageListenerPlugins that implement this interface are notified when an image is opened, closed or updated.InterfaceijImageJjavadoc
ImageMathThis plugin implements ImageJ's Process/Math submenu.Classij.plugin.filterImageJjavadoc
ImagePanelThis class is used by GenericDialog to add images to dialogs.Classij.guiImageJjavadoc
ImagePlusAn ImagePlus contain an ImageProcessor (2D image) or an ImageStack (3D, 4D or 5D image).ClassijImageJjavadoc
Check Code Snippets / Samples for ij.ImagePlus
ImageProcessorThis abstract class is the superclass for classes that processthe four data types (byte, short, float and RGB) supported by ImageJ.Classij.processImageJjavadoc
ImagePropertiesClassij.plugin.filterImageJjavadoc
ImageReaderReads raw 8-bit, 16-bit or 32-bit (float or RGB) images from a stream or URL.Classij.ioImageJjavadoc
ImageRoiAn ImageRoi is an Roi that overlays an image.Classij.guiImageJjavadoc
ImageStackThis class represents an expandable array of images.ClassijImageJjavadoc
ImageStatisticsStatistics, including the histogram, of an image or selection.Classij.processImageJjavadoc
ImagesToStackClassij.pluginImageJjavadoc
ImageWindowA frame for displaying images.Classij.guiImageJjavadoc
ImageWriterWrites a raw image described by a FileInfo object to an OutputStream.Classij.ioImageJjavadoc
ImportDialogThis is a dialog box used to imports raw 8, 16, 24 and 32-bit images.Classij.ioImageJjavadoc
InfoThis plugin implements the Image/Show Info command.Classij.plugin.filterImageJjavadoc
InterpreterThis is the recursive descent parser/interpreter for the ImageJ macro language.Classij.macroImageJjavadoc
Java2This class contains static methods that use the Java 2 API.Classij.utilImageJjavadoc
JavaPropertiesDisplays the Java system properties in a text window.Classij.pluginImageJjavadoc
JavaScriptEvaluator on systems running Java 1.Classij.pluginImageJjavadoc
JpegWriterThe File/Save As/Jpeg command (FileSaver.Classij.pluginImageJjavadoc

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LineThis class represents a straight line selection.Classij.guiImageJjavadoc
LineGraphAnalyzerClassij.plugin.filterImageJjavadoc
LineWidthAdjusterAdjusts the width of line selections.Classij.plugin.frameImageJjavadoc
ListVirtualStackThis plugin opens images specified by list of file paths as a virtual stack.Classij.pluginImageJjavadoc
LogStreamThis class provides the functionality to divert output sent to the System.Classij.ioImageJjavadoc
LookUpTableThis class represents a color look-up table.ClassijImageJjavadoc
LUTThis is an indexed color model that allows an lower and upper bound to be specified.Classij.processImageJjavadoc
LUT_EditorClassij.pluginImageJjavadoc
LutApplierThis plugin implements the Image/Lookup Tables/Apply LUT command.Classij.plugin.filterImageJjavadoc
LutLoaderOpens NIH Image look-up tables (LUTs), 768 byte binary LUTs (256 reds, 256 greens and 256 blues), LUTs in text format, Classij.pluginImageJjavadoc
LutViewerDisplays the active image's look-up table.Classij.plugin.filterImageJjavadoc
MacroThe class contains static methods that perform macro operations.ClassijImageJjavadoc
Macro_RunnerThis class runs macros and scripts installed in the Plugins menu as well as macros and scripts opened using the Plugins/Macros/Run command.Classij.pluginImageJjavadoc
MacroConstantsInterfaceij.macroImageJjavadoc
MacroExtensionInterfaceij.macroImageJjavadoc
MacroInstallerThis plugin implements the Plugins/Macros/Install Macros command.Classij.pluginImageJjavadoc
MacroRunnerThis class runs macros in a separate thread.Classij.macroImageJjavadoc
MacroToolRunnerClassij.plugin.toolImageJjavadoc
MaximumFinderThis ImageJ plug-in filter finds the maxima (or minima) of an image.Classij.plugin.filterImageJjavadoc
MeasurementsInterfaceij.measureImageJjavadoc
MeasurementsWriterWrites measurements to a csv or tab-delimited text file.Classij.pluginImageJjavadoc
MedianCutConverts an RGB image to 8-bit index color using Heckbert's median-cut color quantization algorithm.Classij.processImageJjavadoc
MemoryThis plugin implements the Edit/Options/Memory command.Classij.pluginImageJjavadoc
MemoryMonitorThis plugin continuously plots ImageJ's memory utilization.Classij.plugin.frameImageJjavadoc
MenusThis class installs and updates ImageJ's menus.ClassijImageJjavadoc

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MessageDialogA modal dialog box that displays information.Classij.guiImageJjavadoc
MinimizerMinimizer based on Nelder-Mead simplex method (also known as polytope method), including the 'outside contraction' as described in:Classij.measureImageJjavadoc
MontageMakerClassij.pluginImageJjavadoc
MultiLineLabelCustom component for displaying multiple lines.Classij.guiImageJjavadoc
NewImageNew image dialog box plus several static utility methods for creating images.Classij.guiImageJjavadoc
NewPluginThis class creates a new macro or the Java source for a new plugin.Classij.pluginImageJjavadoc
NextImageOpenerClassij.pluginImageJjavadoc
NonBlockingGenericDialogThis is an extension of GenericDialog that is non-model.Classij.guiImageJjavadoc
OpenDialogThis class displays a dialog window from which the user can select an input file.Classij.ioImageJjavadoc
OpenerOpens tiff (and tiff stacks), dicom, fits, pgm, jpeg, bmp or gif images, and look-up tables, using a file open dialog or a path.Classij.ioImageJjavadoc
OptionsThis plugin implements most of the commands in the Edit/Options sub-menu.Classij.pluginImageJjavadoc
Orthogonal_ViewsThis plugin projects dynamically orthogonal XZ and YZ views of a stack.Classij.pluginImageJjavadoc
OtherInstanceClassijImageJjavadoc
OvalRoiOval region of interestSee Also:Serialized FormClassij.guiImageJjavadoc
OverlayAn Overlay is a list of ROIs that can be drawn non-destructively on an Image.Classij.guiImageJjavadoc
OverlayBrushToolClassij.plugin.toolImageJjavadoc
OverlayCommandsThis plugin implements the commands in the Image/Overlay menu.Classij.pluginImageJjavadoc
OverlayLabelsThis plugin implements the Image/Overlay/Labels command.Classij.pluginImageJjavadoc
ParticleAnalyzer for each line do for each pixel in this line doClassij.plugin.filterImageJjavadoc
PasteControllerClassij.plugin.frameImageJjavadoc
PGM_ReaderThis plugin opens PxM format images.Classij.pluginImageJjavadoc
PixelInspectionToolThis plugin continuously displays the pixel values of the cursor and its surroundings.Classij.plugin.toolImageJjavadoc
PlotThis class creates an image that line graphs, scatter plots and plots of vector fields (arrows) can be drawn on and displayed.Classij.guiImageJjavadoc
PlotCanvasThis subclass of ImageCanvas has special provisions for plots: - Zooming: sets the plot rangeClassij.guiImageJjavadoc
PlotDialogClassij.guiImageJjavadoc

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PlotMakerPlugins that generate "Live" profile plots (Profiler and ZAxisProfiler) displayed in PlotWindows implement this interface.Interfaceij.guiImageJjavadoc
PlotWindowThis class implements the Analyze/Plot Profile command.Classij.guiImageJjavadoc
PlugInPlugins that acquire images or display windows should implement this interface.Interfaceij.pluginImageJjavadoc
PluginClassLoaderImageJ uses this class loader to load plugins and resources from the plugins directory and immediate subdirectories.Classij.ioImageJjavadoc
PlugInDialogThis is a non-modal dialog that plugins can extend.Classij.plugin.frameImageJjavadoc
PlugInFilterImageJ plugins that process an image should implement this interface.Interfaceij.plugin.filterImageJjavadoc
PlugInFilterRunnerClassij.plugin.filterImageJjavadoc
PlugInFrameThis is a closeable window that plugins can extend.Classij.plugin.frameImageJjavadoc
PluginInstallerInstalls plugins dragged and dropped on the "ImageJ" window, or plugins, macros or scripts opened using the Plugins/Install command.Classij.pluginImageJjavadoc
PlugInInterpreterPlugins that run scripts (e.Classij.pluginImageJjavadoc
PlugInToolClassij.plugin.toolImageJjavadoc
PNG_WriterSaves in PNG format using the ImageIO classes.Classij.pluginImageJjavadoc
PNM_WriterClassij.pluginImageJjavadoc
PointRoiThis class represents a collection of points.Classij.guiImageJjavadoc
PointToolOptionsThis plugin implements the Edit/Options/Point Tool command.Classij.pluginImageJjavadoc
PolygonFillerThis class fills polygons using the scan-line filling algorithm described at "http://www.Classij.processImageJjavadoc
PolygonRoiThis class represents a polygon region of interest or polyline of interest.Classij.guiImageJjavadoc
PrefsThis class contains the ImageJ preferences, which are loaded from the "IJ_Props.ClassijImageJjavadoc
PrinterThis plugin implements the File/Page Setup and File/Print commands.Classij.plugin.filterImageJjavadoc
ProfilePlotCreates a density profile plot of a rectangular selection or line selection.Classij.guiImageJjavadoc
ProfilerClassij.pluginImageJjavadoc
ProgramAn object of this type is a tokenized macro file and the associated symbol table.Classij.macroImageJjavadoc
ProgressBarThis is the progress bar that is displayed in the lower right hand corner of the ImageJ window.Classij.guiImageJjavadoc
ProjectorThis plugin creates a sequence of projections of a rotating volume (stack of slices) onto a plane usingnearest-point (surface), brightest-point, or mean-value projection or a weighted combination of nearest-Classij.pluginImageJjavadoc
ProxySettingsThis plugin implements the Plugins/Utilities/Proxy Settings command.Classij.pluginImageJjavadoc

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RandomAccessStreamThis class uses a memory cache to allow seeking within an InputStream.Classij.ioImageJjavadoc
RankFiltersThis plugin implements the Mean, Minimum, Maximum, Variance, Median, Open Maxima, Close Maxima, Remove Outliers, Remove NaNs and Despeckle commands.Classij.plugin.filterImageJjavadoc
RawThis plugin implements the File/Import/Raw command.Classij.pluginImageJjavadoc
RecentOpenerOpens, in a separate thread, files selected from the File/Open Recent submenu.ClassijImageJjavadoc
RecorderThis is ImageJ's macro recorder.Classij.plugin.frameImageJjavadoc
RectToolOptionsThis plugin implements the rounded rectangle tool dialog box.Classij.pluginImageJjavadoc
ResizerThis plugin implements the Edit/Crop and Image/Adjust/Size commands.Classij.pluginImageJjavadoc
ResultsSorterThis plugin implements the Results Table's Sort command.Classij.pluginImageJjavadoc
ResultsTableThis is a table for storing measurement results and strings as columns of values.Classij.measureImageJjavadoc
RGBStackConverterConverts a 2 or 3 slice stack, or a hyperstack, to RGB.Classij.pluginImageJjavadoc
RGBStackMergeThis plugin implements the Image/Color/Merge Channels command.Classij.pluginImageJjavadoc
RGBStackSplitterDeprecated; replaced by ij.Classij.plugin.filterImageJjavadoc
RoiA rectangular region of interest and superclass for the other ROI classes.Classij.guiImageJjavadoc
RoiDecoderDecodes an ImageJ, NIH Image or Scion Image ROI file.Classij.ioImageJjavadoc
RoiEncoderSaves an ROI to a file or stream.Classij.ioImageJjavadoc
RoiEnlargerThis plugin, which enlarges or shrinks selections, implements the Edit/Selection/Enlarge command.Classij.pluginImageJjavadoc
RoiInterpolatorThis class interpolates between ROIs in the ROI Manager.Classij.pluginImageJjavadoc
RoiListenerPlugins that implement this interface are notified when an ROI is created, modified or deleted.Interfaceij.guiImageJjavadoc
RoiManagerThis plugin implements the Analyze/Tools/ROI Manager command.Classij.plugin.frameImageJjavadoc
RoiPropertiesDisplays a dialog that allows the user to specify ROI properties such as color and line width.Classij.guiImageJjavadoc
RoiReaderOpens ImageJ, NIH Image and Scion Image for windows ROI outlines.Classij.pluginImageJjavadoc
RoiRotationToolClassij.plugin.toolImageJjavadoc
RoiRotatorThis plugin implements the Edit/Selection/Rotate command.Classij.pluginImageJjavadoc
RoiScalerThis plugin implements the Edit/Selection/Scale command.Classij.pluginImageJjavadoc
RoiWriterSaves the current ROI outline to a file.Classij.plugin.filterImageJjavadoc

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RotatorThis plugin implements the Image/Rotate/Arbitrarily command.Classij.plugin.filterImageJjavadoc
SaltAndPepperClassij.plugin.filterImageJjavadoc
SaveChangesDialogA modal dialog box with a one line message and "Don't Save", "Cancel" and "Save" buttons.Classij.guiImageJjavadoc
SaveDialogThis class displays a dialog window from which the user can save a file.Classij.ioImageJjavadoc
ScaleBarThis plugin implements the Analyze/Tools/Draw Scale Bar command.Classij.pluginImageJjavadoc
ScaleDialogClassij.plugin.filterImageJjavadoc
ScalerThis plugin implements the Image/Scale command.Classij.pluginImageJjavadoc
ScreenGrabberThis plugin implements the Plugins/Utilities/Capture Screen and Plugins/Utilities/Capture Image commands.Classij.pluginImageJjavadoc
ScrollbarWithLabelThis class, based on Joachim Walter's Image5D package, adds "c", "z" labels and play-pause icons (T) to the stack and hyperstacks dimension sliders.Classij.guiImageJjavadoc
SelectionThis plugin implements the commands in the Edit/Section submenu.Classij.pluginImageJjavadoc
ShadowsClassij.plugin.filterImageJjavadoc
ShapeRoiA subclass of ij.Classij.guiImageJjavadoc
ShortBlitterThis class does bit blitting of 16-bit images.Classij.processImageJjavadoc
ShortProcessorShortProcessors contain a 16-bit unsigned image and methods that operate on that image.Classij.processImageJjavadoc
ShortStatistics16-bit image statistics, including histogram.Classij.processImageJjavadoc
SimpleCommandsThis plugin implements the Plugins/Utilities/Unlock, Image/Rename and Plugins/Utilities/Search commands.Classij.pluginImageJjavadoc
Slicer for FREELINE or POLYLINE ROI, spatial calibration is ignored: the image is sampled at constant _pixel_ increments (distance 1), so Classij.pluginImageJjavadoc
SpecifyROIThis plugin implements the Edit/Selection/Specify command.Classij.pluginImageJjavadoc
SplineFitterThis class fits a spline function to a set of points.Classij.measureImageJjavadoc
Stack_StatisticsThis plugin implements the Image/Stacks/Statistics command.Classij.pluginImageJjavadoc
StackCombinerThis plugin implements the Image/Stacks/Combine command.Classij.pluginImageJjavadoc
StackConverterThis class does stack type conversions.Classij.processImageJjavadoc
StackEditorClassij.pluginImageJjavadoc
StackInserterThis plugin, which implements the Image/Stacks/Tools/Insert command, inserts an image or stack into another image or stack.Classij.pluginImageJjavadoc
StackLabelerThis plugin implements the Image/Stacks/Label command.Classij.plugin.filterImageJjavadoc

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StackMakerThe plugin implements the Image/Stacks/Tools/Montage to Stack command.Classij.pluginImageJjavadoc
StackProcessorThis class processes stacks.Classij.processImageJjavadoc
StackReducerThis plugin implements the Image/Stacks/Tools/Reduce command.Classij.pluginImageJjavadoc
StackReverserThis plugin implements the Image/Transform/Flip Z and Image/Stacks/Tools/Reverse commands.Classij.pluginImageJjavadoc
StackStatisticsStatistics, including the histogram, of a stack.Classij.processImageJjavadoc
StackWindowThis class is an extended ImageWindow that displays stacks and hyperstacks.Classij.guiImageJjavadoc
StackWriterThis plugin, which saves the images in a stack as separate files, implements the File/Save As/Image Sequence command.Classij.pluginImageJjavadoc
StartupThis plugin implements the Edit/Options/Startup command.Classij.pluginImageJjavadoc
StraightenerThis plugin implements the Edit/Selection/Straighten command.Classij.pluginImageJjavadoc
StringSorterA simple QuickSort for String arrays.Classij.utilImageJjavadoc
SubHyperstackMakerThis plugin is used by the Image/Stacks/Tools/Make Substack command to create substacks of hyperstacks.Classij.pluginImageJjavadoc
SubstackMakerThis plugin implements the Image/Stacks/Tools/Make Substack command.Classij.pluginImageJjavadoc
SurfacePlotterClassij.pluginImageJjavadoc
SymbolObjects of this class are used as entries in the macro language symbol table.Classij.macroImageJjavadoc
SyncWindowsThis class "synchronizes" mouse input in multiple windows.Classij.plugin.frameImageJjavadoc
TextThis plugin implements the Edit/Options/Fonts command and the dialog displayed when you double click on the text tool.Classij.pluginImageJjavadoc
TextEncoderSaves an image described by an ImageProcessor object as a tab-delimited text file.Classij.ioImageJjavadoc
TextFileReaderThis plugin displays the contents of a text file in a window.Classij.pluginImageJjavadoc
TextPanelThis is an unlimited size text panel with tab-delimited,labeled and resizable columns.Classij.textImageJjavadoc
TextReaderThis plugin opens a tab or comma delimeted text file as an image.Classij.pluginImageJjavadoc
TextRoiThis class is a rectangular ROI containing text.Classij.guiImageJjavadoc
TextWindowUses a TextPanel to displays text in a window.Classij.textImageJjavadoc
TextWriterThis plugin implements the File/Save As/Text command, which saves the contents of Editor windows and TextWindows (e.Classij.pluginImageJjavadoc
ThreadListerDisplays thread information in a text window.Classij.pluginImageJjavadoc
ThreadUtilClassij.utilImageJjavadoc

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ThresholdAdjusterAdjusts the lower and upper threshold levels of the active image.Classij.plugin.frameImageJjavadoc
ThresholderThis plugin implements the Process/Binary/Make Binary and Convert to Mask commands.Classij.pluginImageJjavadoc
ThresholdToSelectionClassij.plugin.filterImageJjavadoc
TiffDecoderDecodes single and multi-image TIFF files.Classij.ioImageJjavadoc
TiffEncoderSaves an image described by a FileInfo object as an uncompressed, big-endian TIFF file.Classij.ioImageJjavadoc
TimerImageJ plugin for measuring the speed of various Java operations.Classij.pluginImageJjavadoc
TokenizerThis class converts an imageJ macro file file into a token stream.Classij.macroImageJjavadoc
ToolbarClassij.guiImageJjavadoc
ToolsThis class contains static utility methods.Classij.utilImageJjavadoc
TransformerClassij.plugin.filterImageJjavadoc
TranslatorThis plugin implements the Image/Translate command.Classij.plugin.filterImageJjavadoc
TrimmedButtonThis is an extended Button class used to reduce the width of the HUGE buttons on Mac OS X.Classij.guiImageJjavadoc
TypeConverterThis class converts an ImageProcessor to another data type.Classij.processImageJjavadoc
UndoThis class consists of static methods and fields that implement ImageJ's Undo command.ClassijImageJjavadoc
UnsharpMaskThis plugin-filter implements ImageJ's Unsharp Mask command.Classij.plugin.filterImageJjavadoc
URLOpenerOpens TIFFs, ZIP compressed TIFFs, DICOMs, GIFs and JPEGs using a URL.Classij.pluginImageJjavadoc
UserFunctionA plugin should implement this interface for minimizing a single-valued function or fitting a curve with a custom fit function.Interfaceij.measureImageJjavadoc
VirtualStackThis class represents an array of disk-resident images.ClassijImageJjavadoc
WaitForUserDialogThis is a non-modal dialog box used to ask the user to perform some task while a macro or plugin is running.Classij.guiImageJjavadoc
WandThis class implements ImageJ's wand (tracing) tool.Classij.guiImageJjavadoc
WandToolOptionsThis plugin implements the Edit/Options/Wand Tool command.Classij.pluginImageJjavadoc
WildcardMatchThis class allows for simple wildcard pattern matching.Classij.utilImageJjavadoc
WindowManagerThis class consists of static methods used to manage ImageJ's windows.ClassijImageJjavadoc
WindowOrganizerThis class implements the Window menu's "Show All", "Main Window", "Cascade" and "Tile" commands.Classij.pluginImageJjavadoc
WriterThis plugin saves an image in tiff, gif, jpeg, bmp, png, text or raw format.Classij.plugin.filterImageJjavadoc

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XY_ReaderThis plugin implements the File/Import/XY Coordinates command.Classij.pluginImageJjavadoc
XYCoordinatesWrites the XY coordinates and pixel values of all non-background pixels to a tab-delimited text file.Classij.pluginImageJjavadoc
XYWriterSaves the XY coordinates of the current ROI boundary.Classij.plugin.filterImageJjavadoc
YesNoCancelDialogA modal dialog box with a one line message and "Yes", "No" and "Cancel" buttons.Classij.guiImageJjavadoc
ZAxisProfilerClassij.pluginImageJjavadoc
ZoomThis plugin implements the commands in the Image/Zoom submenu.Classij.pluginImageJjavadoc
ZProjectorThis plugin performs a z-projection of the input stack.Classij.pluginImageJjavadoc

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