Name | Description | Type | Package | Framework |
AbstractBlockMatching | | Class | mpicbg.ij.plugin | Fiji |
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BlockMatching_ExtractPoinRoi | | Class | mpicbg.ij.plugin | Fiji |
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BlockMatching_TestParameters | | Class | mpicbg.ij.plugin | Fiji |
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AboutBox | This plugin implements the Help/About ImageJ command by opening the about. | Class | ij.plugin | ImageJ |
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Analyzer | This plugin implements ImageJ's Analyze/Measure and Analyze/Set Measurements commands. | Class | ij.plugin.filter | ImageJ |
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Animator | This plugin animates stacks. | Class | ij.plugin | ImageJ |
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AppearanceOptions | This plugin implements the Edit/Options/Appearance command. | Class | ij.plugin | ImageJ |
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ArrowTool | | Class | ij.plugin.tool | ImageJ |
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ArrowToolOptions | This plugin implements the Edit/Options/Arrow Tool command. | Class | ij.plugin | ImageJ |
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AVI_Reader | ImageJ Plugin for reading an AVI file into an image stack (one slice per video frame) | Class | ij.plugin | ImageJ |
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AVI_Writer | This plugin implements the File/Save As/AVI command. | Class | ij.plugin.filter | ImageJ |
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BackgroundSubtracter | rolling ball algorithm described in Stanley Sternberg's article, "Biomedical ImageProcessing", IEEE Computer, January 1983. | Class | ij.plugin.filter | ImageJ |
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BatchConverter | This plugin implements the File/ /Convert command, which converts the images in a folder to a specified format. | Class | ij.plugin | ImageJ |
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BatchMeasure | This plugin implements the File/Batch/Measure command, which measures all the images in a user-specified folder. | Class | ij.plugin | ImageJ |
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BatchProcessor | This plugin implements the File/Batch/Macro and File/Batch/Virtual Stack commands. | Class | ij.plugin | ImageJ |
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Benchmark | results and additional benchmarks are available at "http://imagej. | Class | ij.plugin.filter | ImageJ |
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Binary | and Fill Holes commands in the Process/Binary submenu. | Class | ij.plugin.filter | ImageJ |
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Binner | This plugin implements the Image/Transform/Bin command. | Class | ij.plugin | ImageJ |
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BMP_Reader | This plugin reads BMP files. | Class | ij.plugin | ImageJ |
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BMP_Writer | http://www. | Class | ij.plugin | ImageJ |
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BrowserLauncher | This plugin implements the File/Import/URL command and the commands in the Help menu that open web pages. | Class | ij.plugin | ImageJ |
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BrushTool | | Class | ij.plugin.tool | ImageJ |
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CalibrationBar | This plugin implements the Analyze/Tools/Calibration Bar command. | Class | ij.plugin | ImageJ |
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Calibrator | | Class | ij.plugin.filter | ImageJ |
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CanvasResizer | This plugin implements the Image/Adjust/Canvas Size command. | Class | ij.plugin | ImageJ |
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ChannelArranger | This plugin implements the Image/Colors/Arrange Channels command, which allows the user to change the order of channels. | Class | ij.plugin | ImageJ |
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Channels | Displays the ImageJ Channels window. | Class | ij.plugin.frame | ImageJ |
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ChannelSplitter | This plugin implements the Image/Color/Split Channels command. | Class | ij.plugin | ImageJ |
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CircularRoiMaker | This class implements the Process/FFT/Make Circular Selection command. | Class | ij.plugin | ImageJ |
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ClassChecker | Checks for duplicate class and JAR files in the plugins folders and deletes older duplicates. | Class | ij.plugin | ImageJ |
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Clipboard | Copies/pastes images to/from the system clipboard. | Class | ij.plugin | ImageJ |
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ColorPicker | | Class | ij.plugin.frame | ImageJ |
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Colors | This plugin implements most of the Edit/Options/Colors command. | Class | ij.plugin | ImageJ |
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ColorThresholder | Selects pixels according to hsb or rgb components. | Class | ij.plugin.frame | ImageJ |
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CommandFinder | | Class | ij.plugin | ImageJ |
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CommandLister | This class is used by the Plugins/Shortcuts/List Shortcuts command to display a list keyboard shortcuts. | Class | ij.plugin | ImageJ |
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Commands | Runs miscellaneous File and Window menu commands. | Class | ij.plugin | ImageJ |
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Compiler | Compiles and runs plugins using the javac compiler. | Class | ij.plugin | ImageJ |
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CompositeConverter | This plugin implements the Image/Color/Make Composite command. | Class | ij.plugin | ImageJ |
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Concatenator | This plugin, which concatenates two or more images or stacks, implements the Image/Stacks/Tools/Concatenate command. | Class | ij.plugin | ImageJ |
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ContrastAdjuster | This plugin implements the Brightness/Contrast, Window/level and Color Balance commands, all in the Image/Adjust sub-menu. | Class | ij.plugin.frame | ImageJ |
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ContrastEnhancer | | Class | ij.plugin | ImageJ |
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ControlPanel | This plugin displays a panel with ImageJ commands in a hierarchical tree structure. | Class | ij.plugin | ImageJ |
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Converter | | Class | ij.plugin | ImageJ |
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Convolver | This plugin convolves images using user user defined kernels. | Class | ij.plugin.filter | ImageJ |
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DICOM | This plugin decodes DICOM files. | Class | ij.plugin | ImageJ |
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Distribution | This plugin implements the Analyze/Distribution command. | Class | ij.plugin | ImageJ |
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DragAndDrop | This class opens images, roi's, luts and text files dragged and dropped on the "ImageJ" window. | Class | ij.plugin | ImageJ |
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Duplicater | | Class | ij.plugin.filter | ImageJ |
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Duplicator | This plugin implements the Image/Duplicate command. | Class | ij.plugin | ImageJ |
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Editor | This is a simple TextArea based editor for editing and compiling plugins. | Class | ij.plugin.frame | ImageJ |
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EDM | This plugin implements the Euclidean Distance Map (EDM), Watershed, Ultimate Eroded Points and Voronoi commands in the Process/Binary submenu. | Class | ij.plugin.filter | ImageJ |
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EventListener | This plugin implements the Plugins/Utilities/Monitor Events command. | Class | ij.plugin | ImageJ |
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ExtendedPlugInFilter | ImageJ plugins that process an image may implement this interface. | Interface | ij.plugin.filter | ImageJ |
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FFT | This class implements the FFT, Inverse FFT and Redisplay Power Spectrum commands in the Process/FFT submenu. | Class | ij.plugin | ImageJ |
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FFTCustomFilter | This class implements the Process/FFT/Custom Filter command. | Class | ij.plugin.filter | ImageJ |
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FFTFilter | This class implements the Process/FFT/Bandpass Filter command. | Class | ij.plugin.filter | ImageJ |
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FFTMath | The class implements the Process/FFT/Math command. | Class | ij.plugin | ImageJ |
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FileInfoVirtualStack | This plugin opens a multi-page TIFF file as a virtual stack. | Class | ij.plugin | ImageJ |
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Filler | This plugin implements ImageJ's Fill, Clear, Clear Outside and Draw commands. | Class | ij.plugin.filter | ImageJ |
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Filters | This plugin implements the Invert, Smooth, Sharpen, Find Edges, and Add Noise commands. | Class | ij.plugin.filter | ImageJ |
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Filters3D | | Class | ij.plugin | ImageJ |
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FITS_Reader | Opens and displays FITS images. | Class | ij.plugin | ImageJ |
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FITS_Writer | This plugin saves a 16 or 32 bit image in FITS format. | Class | ij.plugin | ImageJ |
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Fitter | ImageJ plugin that does curve fitting using the modified CurveFitter class. | Class | ij.plugin.frame | ImageJ |
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FolderOpener | opens a folder of images as a stack. | Class | ij.plugin | ImageJ |
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FractalBoxCounter | Calculate the so-called "capacity" fractal dimension. | Class | ij.plugin.filter | ImageJ |
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GaussianBlur | This plug-in filter uses convolution with a Gaussian function for smoothing. | Class | ij.plugin.filter | ImageJ |
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GaussianBlur3D | | Class | ij.plugin | ImageJ |
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GelAnalyzer | This plugin generates gel profile plots that can be analyzed usingthe wand tool. | Class | ij.plugin | ImageJ |
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GIF_Reader | This plugin opens GIFs and Animated GIFs. | Class | ij.plugin | ImageJ |
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GifWriter | | Class | ij.plugin | ImageJ |
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Grid | This class implements the Analyze/Tools/Grid command. | Class | ij.plugin | ImageJ |
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GroupedZProjector | This plugin implements the Image/Stacks/Tools/Grouped Z Project command. | Class | ij.plugin | ImageJ |
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Histogram | This plugin implements the Analyze/Histogram command. | Class | ij.plugin | ImageJ |
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Hotkeys | | Class | ij.plugin | ImageJ |
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HyperStackConverter | and "HyperStack to Stack" commands. | Class | ij.plugin | ImageJ |
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HyperStackMaker | This plugin implements the File/New/Hyperstack command. | Class | ij.plugin | ImageJ |
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HyperStackReducer | | Class | ij.plugin | ImageJ |
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ImageCalculator | This plugin implements the Process/Image Calculator command. | Class | ij.plugin | ImageJ |
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ImageJ_Updater | This plugin implements the Help/Update ImageJ command. | Class | ij.plugin | ImageJ |
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ImageMath | This plugin implements ImageJ's Process/Math submenu. | Class | ij.plugin.filter | ImageJ |
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ImageProperties | | Class | ij.plugin.filter | ImageJ |
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ImagesToStack | | Class | ij.plugin | ImageJ |
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Info | This plugin implements the Image/Show Info command. | Class | ij.plugin.filter | ImageJ |
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JavaProperties | Displays the Java system properties in a text window. | Class | ij.plugin | ImageJ |
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JavaScriptEvaluator | on systems running Java 1. | Class | ij.plugin | ImageJ |
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JpegWriter | The File/Save As/Jpeg command (FileSaver. | Class | ij.plugin | ImageJ |
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LineGraphAnalyzer | | Class | ij.plugin.filter | ImageJ |
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LineWidthAdjuster | Adjusts the width of line selections. | Class | ij.plugin.frame | ImageJ |
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ListVirtualStack | This plugin opens images specified by list of file paths as a virtual stack. | Class | ij.plugin | ImageJ |
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LUT_Editor | | Class | ij.plugin | ImageJ |
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LutApplier | This plugin implements the Image/Lookup Tables/Apply LUT command. | Class | ij.plugin.filter | ImageJ |
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LutLoader | Opens NIH Image look-up tables (LUTs), 768 byte binary LUTs (256 reds, 256 greens and 256 blues), LUTs in text format, | Class | ij.plugin | ImageJ |
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LutViewer | Displays the active image's look-up table. | Class | ij.plugin.filter | ImageJ |
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Macro_Runner | This class runs macros and scripts installed in the Plugins menu as well as macros and scripts opened using the Plugins/Macros/Run command. | Class | ij.plugin | ImageJ |
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MacroInstaller | This plugin implements the Plugins/Macros/Install Macros command. | Class | ij.plugin | ImageJ |
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MacroToolRunner | | Class | ij.plugin.tool | ImageJ |
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MaximumFinder | This ImageJ plug-in filter finds the maxima (or minima) of an image. | Class | ij.plugin.filter | ImageJ |
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MeasurementsWriter | Writes measurements to a csv or tab-delimited text file. | Class | ij.plugin | ImageJ |
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Memory | This plugin implements the Edit/Options/Memory command. | Class | ij.plugin | ImageJ |
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MemoryMonitor | This plugin continuously plots ImageJ's memory utilization. | Class | ij.plugin.frame | ImageJ |
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MontageMaker | | Class | ij.plugin | ImageJ |
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NewPlugin | This class creates a new macro or the Java source for a new plugin. | Class | ij.plugin | ImageJ |
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NextImageOpener | | Class | ij.plugin | ImageJ |
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Options | This plugin implements most of the commands in the Edit/Options sub-menu. | Class | ij.plugin | ImageJ |
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Orthogonal_Views | This plugin projects dynamically orthogonal XZ and YZ views of a stack. | Class | ij.plugin | ImageJ |
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OverlayBrushTool | | Class | ij.plugin.tool | ImageJ |
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OverlayCommands | This plugin implements the commands in the Image/Overlay menu. | Class | ij.plugin | ImageJ |
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OverlayLabels | This plugin implements the Image/Overlay/Labels command. | Class | ij.plugin | ImageJ |
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ParticleAnalyzer | for each line do for each pixel in this line do | Class | ij.plugin.filter | ImageJ |
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PasteController | | Class | ij.plugin.frame | ImageJ |
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PGM_Reader | This plugin opens PxM format images. | Class | ij.plugin | ImageJ |
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PixelInspectionTool | This plugin continuously displays the pixel values of the cursor and its surroundings. | Class | ij.plugin.tool | ImageJ |
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PlugIn | Plugins that acquire images or display windows should implement this interface. | Interface | ij.plugin | ImageJ |
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PlugInDialog | This is a non-modal dialog that plugins can extend. | Class | ij.plugin.frame | ImageJ |
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PlugInFilter | ImageJ plugins that process an image should implement this interface. | Interface | ij.plugin.filter | ImageJ |
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PlugInFilterRunner | | Class | ij.plugin.filter | ImageJ |
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PlugInFrame | This is a closeable window that plugins can extend. | Class | ij.plugin.frame | ImageJ |
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PluginInstaller | Installs plugins dragged and dropped on the "ImageJ" window, or plugins, macros or scripts opened using the Plugins/Install command. | Class | ij.plugin | ImageJ |
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PlugInInterpreter | Plugins that run scripts (e. | Class | ij.plugin | ImageJ |
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PlugInTool | | Class | ij.plugin.tool | ImageJ |
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PNG_Writer | Saves in PNG format using the ImageIO classes. | Class | ij.plugin | ImageJ |
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PNM_Writer | | Class | ij.plugin | ImageJ |
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PointToolOptions | This plugin implements the Edit/Options/Point Tool command. | Class | ij.plugin | ImageJ |
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Printer | This plugin implements the File/Page Setup and File/Print commands. | Class | ij.plugin.filter | ImageJ |
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Profiler | | Class | ij.plugin | ImageJ |
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Projector | This plugin creates a sequence of projections of a rotating volume (stack of slices) onto a plane usingnearest-point (surface), brightest-point, or mean-value projection or a weighted combination of nearest- | Class | ij.plugin | ImageJ |
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ProxySettings | This plugin implements the Plugins/Utilities/Proxy Settings command. | Class | ij.plugin | ImageJ |
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RankFilters | This plugin implements the Mean, Minimum, Maximum, Variance, Median, Open Maxima, Close Maxima, Remove Outliers, Remove NaNs and Despeckle commands. | Class | ij.plugin.filter | ImageJ |
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Raw | This plugin implements the File/Import/Raw command. | Class | ij.plugin | ImageJ |
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Recorder | This is ImageJ's macro recorder. | Class | ij.plugin.frame | ImageJ |
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RectToolOptions | This plugin implements the rounded rectangle tool dialog box. | Class | ij.plugin | ImageJ |
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Resizer | This plugin implements the Edit/Crop and Image/Adjust/Size commands. | Class | ij.plugin | ImageJ |
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ResultsSorter | This plugin implements the Results Table's Sort command. | Class | ij.plugin | ImageJ |
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RGBStackConverter | Converts a 2 or 3 slice stack, or a hyperstack, to RGB. | Class | ij.plugin | ImageJ |
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RGBStackMerge | This plugin implements the Image/Color/Merge Channels command. | Class | ij.plugin | ImageJ |
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RGBStackSplitter | Deprecated; replaced by ij. | Class | ij.plugin.filter | ImageJ |
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RoiEnlarger | This plugin, which enlarges or shrinks selections, implements the Edit/Selection/Enlarge command. | Class | ij.plugin | ImageJ |
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RoiInterpolator | This class interpolates between ROIs in the ROI Manager. | Class | ij.plugin | ImageJ |
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RoiManager | This plugin implements the Analyze/Tools/ROI Manager command. | Class | ij.plugin.frame | ImageJ |
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RoiReader | Opens ImageJ, NIH Image and Scion Image for windows ROI outlines. | Class | ij.plugin | ImageJ |
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RoiRotationTool | | Class | ij.plugin.tool | ImageJ |
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RoiRotator | This plugin implements the Edit/Selection/Rotate command. | Class | ij.plugin | ImageJ |
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RoiScaler | This plugin implements the Edit/Selection/Scale command. | Class | ij.plugin | ImageJ |
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RoiWriter | Saves the current ROI outline to a file. | Class | ij.plugin.filter | ImageJ |
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Rotator | This plugin implements the Image/Rotate/Arbitrarily command. | Class | ij.plugin.filter | ImageJ |
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SaltAndPepper | | Class | ij.plugin.filter | ImageJ |
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ScaleBar | This plugin implements the Analyze/Tools/Draw Scale Bar command. | Class | ij.plugin | ImageJ |
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ScaleDialog | | Class | ij.plugin.filter | ImageJ |
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Scaler | This plugin implements the Image/Scale command. | Class | ij.plugin | ImageJ |
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ScreenGrabber | This plugin implements the Plugins/Utilities/Capture Screen and Plugins/Utilities/Capture Image commands. | Class | ij.plugin | ImageJ |
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Selection | This plugin implements the commands in the Edit/Section submenu. | Class | ij.plugin | ImageJ |
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Shadows | | Class | ij.plugin.filter | ImageJ |
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SimpleCommands | This plugin implements the Plugins/Utilities/Unlock, Image/Rename and Plugins/Utilities/Search commands. | Class | ij.plugin | ImageJ |
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Slicer | for FREELINE or POLYLINE ROI, spatial calibration is ignored: the image is sampled at constant _pixel_ increments (distance 1), so | Class | ij.plugin | ImageJ |
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SpecifyROI | This plugin implements the Edit/Selection/Specify command. | Class | ij.plugin | ImageJ |
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Stack_Statistics | This plugin implements the Image/Stacks/Statistics command. | Class | ij.plugin | ImageJ |
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StackCombiner | This plugin implements the Image/Stacks/Combine command. | Class | ij.plugin | ImageJ |
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StackEditor | | Class | ij.plugin | ImageJ |
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StackInserter | This plugin, which implements the Image/Stacks/Tools/Insert command, inserts an image or stack into another image or stack. | Class | ij.plugin | ImageJ |
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StackLabeler | This plugin implements the Image/Stacks/Label command. | Class | ij.plugin.filter | ImageJ |
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StackMaker | The plugin implements the Image/Stacks/Tools/Montage to Stack command. | Class | ij.plugin | ImageJ |
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StackReducer | This plugin implements the Image/Stacks/Tools/Reduce command. | Class | ij.plugin | ImageJ |
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StackReverser | This plugin implements the Image/Transform/Flip Z and Image/Stacks/Tools/Reverse commands. | Class | ij.plugin | ImageJ |
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StackWriter | This plugin, which saves the images in a stack as separate files, implements the File/Save As/Image Sequence command. | Class | ij.plugin | ImageJ |
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Startup | This plugin implements the Edit/Options/Startup command. | Class | ij.plugin | ImageJ |
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Straightener | This plugin implements the Edit/Selection/Straighten command. | Class | ij.plugin | ImageJ |
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SubHyperstackMaker | This plugin is used by the Image/Stacks/Tools/Make Substack command to create substacks of hyperstacks. | Class | ij.plugin | ImageJ |
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SubstackMaker | This plugin implements the Image/Stacks/Tools/Make Substack command. | Class | ij.plugin | ImageJ |
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SurfacePlotter | | Class | ij.plugin | ImageJ |
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SyncWindows | This class "synchronizes" mouse input in multiple windows. | Class | ij.plugin.frame | ImageJ |
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Text | This plugin implements the Edit/Options/Fonts command and the dialog displayed when you double click on the text tool. | Class | ij.plugin | ImageJ |
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TextFileReader | This plugin displays the contents of a text file in a window. | Class | ij.plugin | ImageJ |
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TextReader | This plugin opens a tab or comma delimeted text file as an image. | Class | ij.plugin | ImageJ |
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TextWriter | This plugin implements the File/Save As/Text command, which saves the contents of Editor windows and TextWindows (e. | Class | ij.plugin | ImageJ |
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ThreadLister | Displays thread information in a text window. | Class | ij.plugin | ImageJ |
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ThresholdAdjuster | Adjusts the lower and upper threshold levels of the active image. | Class | ij.plugin.frame | ImageJ |
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Thresholder | This plugin implements the Process/Binary/Make Binary and Convert to Mask commands. | Class | ij.plugin | ImageJ |
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ThresholdToSelection | | Class | ij.plugin.filter | ImageJ |
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Timer | ImageJ plugin for measuring the speed of various Java operations. | Class | ij.plugin | ImageJ |
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Transformer | | Class | ij.plugin.filter | ImageJ |
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Translator | This plugin implements the Image/Translate command. | Class | ij.plugin.filter | ImageJ |
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UnsharpMask | This plugin-filter implements ImageJ's Unsharp Mask command. | Class | ij.plugin.filter | ImageJ |
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URLOpener | Opens TIFFs, ZIP compressed TIFFs, DICOMs, GIFs and JPEGs using a URL. | Class | ij.plugin | ImageJ |
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WandToolOptions | This plugin implements the Edit/Options/Wand Tool command. | Class | ij.plugin | ImageJ |
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WindowOrganizer | This class implements the Window menu's "Show All", "Main Window", "Cascade" and "Tile" commands. | Class | ij.plugin | ImageJ |
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Writer | This plugin saves an image in tiff, gif, jpeg, bmp, png, text or raw format. | Class | ij.plugin.filter | ImageJ |
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XY_Reader | This plugin implements the File/Import/XY Coordinates command. | Class | ij.plugin | ImageJ |
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XYCoordinates | Writes the XY coordinates and pixel values of all non-background pixels to a tab-delimited text file. | Class | ij.plugin | ImageJ |
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XYWriter | Saves the XY coordinates of the current ROI boundary. | Class | ij.plugin.filter | ImageJ |
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ZAxisProfiler | | Class | ij.plugin | ImageJ |
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Zoom | This plugin implements the commands in the Image/Zoom submenu. | Class | ij.plugin | ImageJ |
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ZProjector | This plugin performs a z-projection of the input stack. | Class | ij.plugin | ImageJ |