| Name | Description | Type | Package | Framework |
| Bookmarks | Class | bdv.tools.bookmarks | Fiji | |
| BookmarksEditor | Class | bdv.tools.bookmarks | Fiji | |
| BookmarkTextOverlayAnimator | Draw one line of text in the center or bottom right of the display. | Class | bdv.tools.bookmarks | Fiji |
| BoundingBoxDialog | Class | bdv.tools.boundingbox | Fiji | |
| BoundingBoxOverlay | Class | bdv.tools.boundingbox | Fiji | |
| BoundingBoxOverlay .BoundingBoxOverlaySource | Interface | bdv.tools.boundingbox.BoundingBoxOverlay | Fiji | |
| BoundingBoxUtil | Class | bdv.tools.boundingbox | Fiji | |
| BoxRealRandomAccessible | Class | bdv.tools.boundingbox | Fiji | |
| BoxSelectionPanel | Class | bdv.tools.boundingbox | Fiji | |
| BoxSelectionPanel .SelectionUpdateListener | Interface | bdv.tools.boundingbox.BoxSelectionPanel | Fiji | |
| BrightnessDialog | Adjust brightness and colors for individual (or groups of) setups. | Class | bdv.tools.brightness | Fiji |
| BrightnessDialog .ColorsPanel | Class | bdv.tools.brightness.BrightnessDialog | Fiji | |
| BrightnessDialog .MinMaxPanel | A panel containing min/max SliderPanels, view setup check-boxes and advanced settings. | Class | bdv.tools.brightness.BrightnessDialog | Fiji |
| BrightnessDialog .MinMaxPanels | Class | bdv.tools.brightness.BrightnessDialog | Fiji | |
| ConverterSetup | Modify the range and color of the converter for a source. | Interface | bdv.tools.brightness | Fiji |
| CropDialog | Class | bdv.tools.crop | Fiji | |
| CropImgLoader | This ImgLoader provides views and transformations into a cropped region of a data-set (provided by list of Sources). | Class | bdv.tools.crop | Fiji |
| HelpDialog | Class | bdv.tools | Fiji | |
| InitializeViewerState | Class | bdv.tools | Fiji | |
| ManualSourceTransforms | Class | bdv.tools.transformation | Fiji | |
| ManualTransformation | Class | bdv.tools.transformation | Fiji | |
| ManualTransformationEditor | Class | bdv.tools.transformation | Fiji | |
| MinMaxGroup | An int interval. | Class | bdv.tools.brightness | Fiji |
| MinMaxGroup .UpdateListener | Interface | bdv.tools.brightness.MinMaxGroup | Fiji | |
| RealARGBColorConverterSetup | Class | bdv.tools.brightness | Fiji | |
| RecordMaxProjectionDialog | Class | bdv.tools | Fiji | |
| RecordMovieDialog | Class | bdv.tools | Fiji | |
| SetupAssignments | Manage a (fixed) set of ConverterSetups and (changing) set of MinMaxGroups, such that the following is always true: | Class | bdv.tools.brightness | Fiji |
| SetupAssignments .UpdateListener | Interface | bdv.tools.brightness.SetupAssignments | Fiji | |
| SliderPanel | A JSlider with a JSpinner next to it, both modifying the sameSee Also:Serialized Form | Class | bdv.tools.brightness | Fiji |
| ToggleDialogAction | Class | bdv.tools | Fiji | |
| TransformedSource | A Source that wraps another Source and allows to decorate it with an extra AffineTransform3D. | Class | bdv.tools.transformation | Fiji |
| VisibilityAndGroupingDialog | Class | bdv.tools | Fiji | |
| VisibilityAndGroupingDialog .GroupingPanel | Class | bdv.tools.VisibilityAndGroupingDialog | Fiji | |
| VisibilityAndGroupingDialog .ModePanel | Class | bdv.tools.VisibilityAndGroupingDialog | Fiji | |
| VisibilityAndGroupingDialog .VisibilityPanel | Class | bdv.tools.VisibilityAndGroupingDialog | Fiji | |
| XmlIoTransformedSources | Class | bdv.tools.transformation | Fiji | |