| Name | Description | Type | Package | Framework |
| LicenseDialog | Class | cytoscape.dialogs.plugins | CytoScape | |
| ManagerModel | Fairly similar to DefaultTreeModel but I wanted to add some extra functionality to removing/adding nodes and use my own node objects | Class | cytoscape.dialogs.plugins | CytoScape |
| PluginIndex | Class | cytoscape.dialogs.plugins | CytoScape | |
| PluginManageDialog | Class | cytoscape.dialogs.plugins | CytoScape | |
| PluginManageDialog .CommonError | Class | cytoscape.dialogs.plugins | CytoScape | |
| PluginManageDialog .PluginInstallStatus | Class | cytoscape.dialogs.plugins | CytoScape | |
| PluginUpdateDialog | Class | cytoscape.dialogs.plugins | CytoScape | |
| PluginUrlDialog | Class | cytoscape.dialogs.plugins | CytoScape | |
| TreeCellRenderer | Class | cytoscape.dialogs.plugins | CytoScape | |
| TreeNode | See Also:Serialized FormFields inherited from class javax. | Class | cytoscape.dialogs.plugins | CytoScape |