Name | Description | Type | Package | Framework |
AboutDialog | About page for web service clients or other plugins. | Class | cytoscape.util.swing | CytoScape |
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AbstractCellEditor | | Class | cytoscape.util.swing | CytoScape |
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AbstractScaler | Used to scale a list of values to [a,b]Constructor SummaryAbstractScaler() | Class | cytoscape.util | CytoScape |
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AbstractTreeTableModel | | Class | cytoscape.util.swing | CytoScape |
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ArrayIntEnumerator | A utility class which conveniently converts an array of integers into an IntEnumerator (an enumeration of integers). | Class | cytoscape.util.intr | CytoScape |
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ArrayIntIterator | A utility class which conveniently converts an array of integers into an IntIterator (an iteration of integers). | Class | cytoscape.util.intr | CytoScape |
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AttributeImportPanel | General GUI component for importing attributes. | Class | cytoscape.util.swing | CytoScape |
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BioDataServerUtil | | Class | cytoscape.util | CytoScape |
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BitmapExporter | Bitmap exporter by the ImageIO class. | Class | cytoscape.util.export | CytoScape |
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BitSetPerformance | | Class | cytoscape.util.intr.test | CytoScape |
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BookmarksUtil | Utility methods for getting entries in the bookmark object. | Class | cytoscape.util | CytoScape |
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CheckBoxJList | This class is based on CheckBoxJList: from SWING HACKS ISBN: 0-596-00907-0 | Class | cytoscape.util.swing | CytoScape |
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ColorUtil | Color utility class to convert Java color object to string and vice versa. | Class | cytoscape.util | CytoScape |
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ColumnResizer | Automatically resize column based on the objects in the cell. | Class | cytoscape.util.swing | CytoScape |
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CreditScreen | | Class | cytoscape.util | CytoScape |
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CyAbstractEdit | A small convenience class that can be used to create new edits. | Class | cytoscape.util.undo | CytoScape |
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CyCollapsiblePanel | The user-triggered collapsable panel containing the component (trigger) in the titled borderSee Also:Serialized Form | Class | cytoscape.util.swing | CytoScape |
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CyColorChooser | This is an annoying re-implementation of JColorChooser. | Class | cytoscape.util | CytoScape |
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CyFileFilter | A convenience implementation of FileFilter that filters out all files except for those type extensions that it knows about. | Class | cytoscape.util | CytoScape |
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CyNetworkNaming | | Class | cytoscape.util | CytoScape |
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CytoscapeAction | | Class | cytoscape.util | CytoScape |
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CytoscapeMenuBar | | Class | cytoscape.util | CytoScape |
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CytoscapeProgressMonitor | CytoscapeProgressMonitor. | Class | cytoscape.util | CytoScape |
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CytoscapeToolBar | | Class | cytoscape.util | CytoScape |
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CyUndo | A tiny class for supporting undo in the Cytoscape context. | Class | cytoscape.util.undo | CytoScape |
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DropDownMenuButton | Button with drop down menu. | Class | cytoscape.util.swing | CytoScape |
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Exec | | Class | cytoscape.util | CytoScape |
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Exporter | Interface for exporting a network view to a graphics file. | Interface | cytoscape.util.export | CytoScape |
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FileUtil | Provides a platform-dependent way to open files. | Class | cytoscape.util | CytoScape |
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FilterHistoryJList | JList with incremntal search & search history. | Class | cytoscape.util.swing | CytoScape |
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GMLFileFilter | FileFilter for Reading in GML Files. | Class | cytoscape.util | CytoScape |
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GraphSetUtils | | Class | cytoscape.util | CytoScape |
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IndeterminateProgressBar | This class creates a dialog with a JProgressBar in indeterminate state. | Class | cytoscape.util | CytoScape |
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IntArray | A dynamically growing array of integers. | Class | cytoscape.util.intr | CytoScape |
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IntBTree | An in-memory B+-tree that stores integers. | Class | cytoscape.util.intr | CytoScape |
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IntBTreeConstructionTuner | | Class | cytoscape.util.intr.test | CytoScape |
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IntBTreePerformance | | Class | cytoscape.util.intr.test | CytoScape |
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IntBTreeQueryTuner | | Class | cytoscape.util.intr.test | CytoScape |
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IntEnumerator | An enumeration over a list of 32 bit integers. | Interface | cytoscape.util.intr | CytoScape |
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IntHash | An insert-only hashtable that has non-negative 32 bit integer keys; no satellite data is stored in this hashtable. | Class | cytoscape.util.intr | CytoScape |
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IntHashPerformance | | Class | cytoscape.util.intr.test | CytoScape |
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IntIntHash | An insert-only hashtable that has non-negative 32 bit integer keys and non-negative 32 bit integer values. | Class | cytoscape.util.intr | CytoScape |
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IntIterator | An iteration over a list of 32 bit integers. | Interface | cytoscape.util.intr | CytoScape |
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IntObjHash | An insert-only hashtable that has non-negative 32 bit integer keys and non-null object values. | Class | cytoscape.util.intr | CytoScape |
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IntQueue | A first-in, first-out container of 32 bit integers. | Class | cytoscape.util.intr | CytoScape |
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IntStack | A first-in, last-out container of 32 bit integers. | Class | cytoscape.util.intr | CytoScape |
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IntTHash | An insert-only hashtable that has non-negative 32 bit integer keys and non-null object values. | Class | cytoscape.util.intr | CytoScape |
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JnlpWriterUtil | | Class | cytoscape.util | CytoScape |
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JStatusBar | Simple status bar with 3 fields. | Class | cytoscape.util.swing | CytoScape |
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JTreeTable | This example shows how to create a simple JTreeTable component, by using a JTree as a renderer (and editor) for the cells in a particular column in the | Class | cytoscape.util.swing | CytoScape |
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LongEnumerator | An enumeration over a list of 64 bit integers. | Interface | cytoscape.util.intr | CytoScape |
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LongLongHash | An insert-only hashtable that has non-negative 64 bit integer keys and non-negative 64 bit integer values. | Class | cytoscape.util.intr | CytoScape |
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MacAppConfig | Configures the Mac OS X Info. | Class | cytoscape.util | CytoScape |
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MathUtil | | Class | cytoscape.util | CytoScape |
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MemoryReporter | A class used to track JVM memory usage. | Class | cytoscape.util | CytoScape |
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MinIntHeap | A heap is an implementation of a priority queue. | Class | cytoscape.util.intr | CytoScape |
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MinIntHeapPerformance | | Class | cytoscape.util.intr.test | CytoScape |
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MinMaxDouble | find the min and max of a 1- or 2-d aarray of doubles. | Class | cytoscape.util | CytoScape |
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MinMaxInt | find the min and max of a 1- or 2-d array of ints. | Class | cytoscape.util | CytoScape |
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Misc | | Class | cytoscape.util | CytoScape |
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ModuleProperties | | Interface | cytoscape.util | CytoScape |
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ModulePropertiesImpl | | Class | cytoscape.util | CytoScape |
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MonitoredTask | | Interface | cytoscape.util | CytoScape |
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MutableBool | | Class | cytoscape.util | CytoScape |
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MutableInt | | Class | cytoscape.util | CytoScape |
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MutableString | | Class | cytoscape.util | CytoScape |
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NestedNetworkViewUpdater | This class manages images that represent nested networks. | Class | cytoscape.util | CytoScape |
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NetworkSelectorPanel | | Class | cytoscape.util.swing | CytoScape |
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NNFFileFilter | File filter for Nested Network Format (NNF). | Class | cytoscape.util | CytoScape |
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OpenBrowser | | Class | cytoscape.util | CytoScape |
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PDFExporter | PDF exporter by the iText library. | Class | cytoscape.util.export | CytoScape |
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PercentUtil | Helper Class for Calculating Percentage of Multi-Step Processes. | Class | cytoscape.util | CytoScape |
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PrimesGenerator | | Class | cytoscape.util.intr.test | CytoScape |
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PropUtil | A stateless utility class that makes it easy to parse int and boolean values from a Properties object. | Class | cytoscape.util | CytoScape |
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ProxyHandler | | Class | cytoscape.util | CytoScape |
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PSExporter | | Class | cytoscape.util.export | CytoScape |
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RecentlyOpenedTracker | A class to keep track of a short list of recently opened URLs. | Class | cytoscape.util | CytoScape |
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RedoAction | An action that calls redo for the most recent edit in the undoable edit stack. | Class | cytoscape.util.undo | CytoScape |
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Scaler | | Interface | cytoscape.util | CytoScape |
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ScalerFactory | | Class | cytoscape.util | CytoScape |
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ScalingMethod | enum ScalingMethodextends EnumEnum Constant SummaryLINEAR_LOWER | Class | cytoscape.util | CytoScape |
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SIFFileFilter | FileFilter for Reading in Cytoscape SIF Files. | Class | cytoscape.util | CytoScape |
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SVGExporter | SVG exporter by the batik library. | Class | cytoscape.util.export | CytoScape |
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SwingWorker | This is the 3rd version of SwingWorker (also known as SwingWorker 3), an abstract class that you subclass to | Class | cytoscape.util | CytoScape |
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TopoGraphNode | Represents a node in a topological graph. | Interface | cytoscape.util | CytoScape |
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TopologicalSort | See for example http://en. | Class | cytoscape.util | CytoScape |
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Transform | | Class | cytoscape.util | CytoScape |
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TreeTableModel | TreeTableModel is the model used by a JTreeTable. | Interface | cytoscape.util.swing | CytoScape |
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TreeTableModelAdapter | This is a wrapper class takes a TreeTableModel and implements the table model interface. | Class | cytoscape.util.swing | CytoScape |
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UndoAction | An action that calls undo for the most recent edit in the undoable edit stack. | Class | cytoscape.util.undo | CytoScape |
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URLUtil | | Class | cytoscape.util | CytoScape |
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WidestStringComboBoxModel | This ComboBoxModel tracks the widest string getLabel(Object anObject) should be overridden to derive the String from | Class | cytoscape.util.swing | CytoScape |
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WidestStringComboBoxPopupMenuListener | Listener that can be attached to a JComboBox. | Class | cytoscape.util.swing | CytoScape |
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WidestStringProvider | Marker interface to decouple WidestStringComboBoxPopupMenuListener from WidestStringComboBoxModel. | Interface | cytoscape.util.swing | CytoScape |
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WindowUtilities | WindowUtilities keeps track of open windows and may close down the JVM when all primary windows are closed (see #setExitJVMWhenAllWindowsClose | Class | cytoscape.util.shadegrown | CytoScape |
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XGMMLFileFilter | FileFilter for Reading in XGMML Files. | Class | cytoscape.util | CytoScape |
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ZipUtil | Compression-related methods mainly for Session Writer. | Class | cytoscape.util | CytoScape |