Name | Description | Type | Package | Framework |
CompressionHeaderFactory | A class responsible for decisions about which encodings to use for a given set of records. | Class | htsjdk.samtools.cram.build | HtsJDK |
ContainerFactory | Class | htsjdk.samtools.cram.build | HtsJDK | |
ContainerParser | Class | htsjdk.samtools.cram.build | HtsJDK | |
Cram2SamRecordFactory | Class | htsjdk.samtools.cram.build | HtsJDK | |
CramContainerIterator | An iterator of CRAM containers read from an InputStream. | Class | htsjdk.samtools.cram.build | HtsJDK |
CramIO | A collection of methods to open and close CRAM files. | Class | htsjdk.samtools.cram.build | HtsJDK |
CramNormalizer | Class | htsjdk.samtools.cram.build | HtsJDK | |
CramSpanContainerIterator | An iterator of CRAM containers read from locations in SeekableStream. | Class | htsjdk.samtools.cram.build | HtsJDK |
Sam2CramRecordFactory | Class | htsjdk.samtools.cram.build | HtsJDK | |