Name | Description | Type | Package | Framework |
BEDCodec | Codec for parsing BED file, as described by UCSC See https://genome. | Class | htsjdk.tribble.bed | HtsJDK |
BEDCodec .StartOffset | Indicate whether co-ordinates or 0-based or 1-based. | Class | htsjdk.tribble.bed | HtsJDK |
BEDFeature | Interface | htsjdk.tribble.bed | HtsJDK | |
FullBEDFeature | Object for full BED file. | Class | htsjdk.tribble.bed | HtsJDK |
SimpleBEDFeature | Feature from a BED file without exon blocks. | Class | htsjdk.tribble.bed | HtsJDK |