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#Org.biojava.nbio.core.sequence.features Classes and Interfaces - 11 results found.
NameDescriptionTypePackageFramework
AbstractFeatureA feature is currently any descriptive item that can be associated with a sequence position(s) A feature has a type and a source which is currently a string to allow flexibility for the userClassorg.biojava.nbio.core.sequence.featuresBioJava
DatabaseReferenceInterfaceIf a SequenceProxyReader implements this interface then that external source has a list of cross reference id(s)Interfaceorg.biojava.nbio.core.sequence.featuresBioJava
DBReferenceInfoIf you have a uniprot ID then it is possible to get a collection of other id(s) that the protein is known by.Classorg.biojava.nbio.core.sequence.featuresBioJava
FeatureDbReferenceInfoIt is DBReferenceInfo which implements FeatureInterface.Classorg.biojava.nbio.core.sequence.featuresBioJava
FeatureInterfaceInterface class to handle describing arbitrary features.Interfaceorg.biojava.nbio.core.sequence.featuresBioJava
FeatureRetrieverIf a SequenceProxyReader implements this interface then that external source has a list featuresInterfaceorg.biojava.nbio.core.sequence.featuresBioJava
FeaturesKeyWordInterfaceModels the keywords that are annotated for a protein sequence at Uniprot.Interfaceorg.biojava.nbio.core.sequence.featuresBioJava
QualifierClassorg.biojava.nbio.core.sequence.featuresBioJava
QualityFeatureDNA Sequences produced by modern sequencers usually have quality informaion attached to them.Classorg.biojava.nbio.core.sequence.featuresBioJava
QuantityFeatureIt is common to have a numerical value or values associated with a feature.Classorg.biojava.nbio.core.sequence.featuresBioJava
TextFeatureA implmentation of AbstractFeatureAuthor:Scooter Willis Classorg.biojava.nbio.core.sequence.featuresBioJava