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#Org.biojava.nbio.core.sequence.location Classes and Interfaces - 17 results found.
| Name | Description | Type | Package | Framework |
| AbstractLocation | Base abstraction of a location which encodes for the majority of important features about a location such as the start, end and strand | Class | org.biojava.nbio.core.sequence.location.template | BioJava |
| AccesionedLocation | A location which is bound to an AccessionID. | Interface | org.biojava.nbio.core.sequence.location.template | BioJava |
| FuzzyPoint | Class | org.biojava.nbio.core.sequence.location | BioJava | |
| InsdcLocations | A collection of locations which are used whenever we work with INSDC; some of which could be deprecated (from INSDC's point of view) yet appear | Class | org.biojava.nbio.core.sequence.location | BioJava |
| InsdcLocations .BondLocation | Used to represent bond locations equivalent to bond(7,8) or bond(7). | Class | org.biojava.nbio.core.sequence.location | BioJava |
| InsdcLocations .GroupLocation | Deprecated in INSDC yet still appears; equivalent to the order() directive except no 5' to 3' ordering is defined. | Class | org.biojava.nbio.core.sequence.location | BioJava |
| InsdcLocations .OneOfLocation | Deprecated in INSDC; refers to a set of locations of which one location could be valid e. | Class | org.biojava.nbio.core.sequence.location | BioJava |
| InsdcLocations .OrderLocation | Used to describe a 5' to 3' ordering but no firm assurance it is correctSee Also:Serialized Form | Class | org.biojava.nbio.core.sequence.location | BioJava |
| InsdcParser | Parser for working with INSDC style locations. | Class | org.biojava.nbio.core.sequence.location | BioJava |
| Location | Sets of integers used to represent the location of features on sequence. | Interface | org.biojava.nbio.core.sequence.location.template | BioJava |
| Location .Tools | Helper methods for use with the Location classes. | Class | org.biojava.nbio.core.sequence.location.template | BioJava |
| LocationHelper | Helper methods for use with the Location classes. | Class | org.biojava.nbio.core.sequence.location | BioJava |
| Point | Interface | org.biojava.nbio.core.sequence.location.template | BioJava | |
| Point .Resolver | Interface | org.biojava.nbio.core.sequence.location.template | BioJava | |
| SequenceLocation | A location in a sequence that keeps a reference to its parent sequenceAuthor:Scooter Willis , Paolo PavanSee Also:Serialized Form | Class | org.biojava.nbio.core.sequence.location | BioJava |
| SimpleLocation | Very basic implementation of the Location interface which defines a series of simple constructors. | Class | org.biojava.nbio.core.sequence.location | BioJava |
| SimplePoint | Basic implementation of the Point interface. | Class | org.biojava.nbio.core.sequence.location | BioJava |