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#Org.biojava.nbio.core.sequence.location Classes and Interfaces - 17 results found.
NameDescriptionTypePackageFramework
AbstractLocationBase abstraction of a location which encodes for the majority of important features about a location such as the start, end and strandClassorg.biojava.nbio.core.sequence.location.templateBioJava
AccesionedLocationA location which is bound to an AccessionID.Interfaceorg.biojava.nbio.core.sequence.location.templateBioJava
FuzzyPointClassorg.biojava.nbio.core.sequence.locationBioJava
InsdcLocationsA collection of locations which are used whenever we work with INSDC; some of which could be deprecated (from INSDC's point of view) yet appearClassorg.biojava.nbio.core.sequence.locationBioJava
InsdcLocations .BondLocationUsed to represent bond locations equivalent to bond(7,8) or bond(7).Classorg.biojava.nbio.core.sequence.locationBioJava
InsdcLocations .GroupLocationDeprecated in INSDC yet still appears; equivalent to the order() directive except no 5' to 3' ordering is defined.Classorg.biojava.nbio.core.sequence.locationBioJava
InsdcLocations .OneOfLocationDeprecated in INSDC; refers to a set of locations of which one location could be valid e.Classorg.biojava.nbio.core.sequence.locationBioJava
InsdcLocations .OrderLocationUsed to describe a 5' to 3' ordering but no firm assurance it is correctSee Also:Serialized FormClassorg.biojava.nbio.core.sequence.locationBioJava
InsdcParserParser for working with INSDC style locations.Classorg.biojava.nbio.core.sequence.locationBioJava
LocationSets of integers used to represent the location of features on sequence.Interfaceorg.biojava.nbio.core.sequence.location.templateBioJava
Location .ToolsHelper methods for use with the Location classes.Classorg.biojava.nbio.core.sequence.location.templateBioJava
LocationHelperHelper methods for use with the Location classes.Classorg.biojava.nbio.core.sequence.locationBioJava
PointInterfaceorg.biojava.nbio.core.sequence.location.templateBioJava
Point .ResolverInterfaceorg.biojava.nbio.core.sequence.location.templateBioJava
SequenceLocationA location in a sequence that keeps a reference to its parent sequenceAuthor:Scooter Willis , Paolo PavanSee Also:Serialized FormClassorg.biojava.nbio.core.sequence.locationBioJava
SimpleLocationVery basic implementation of the Location interface which defines a series of simple constructors.Classorg.biojava.nbio.core.sequence.locationBioJava
SimplePointBasic implementation of the Point interface.Classorg.biojava.nbio.core.sequence.locationBioJava