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#Org.biojava.nbio.core.sequence.storage Classes and Interfaces - 10 results found.
| Name | Description | Type | Package | Framework |
| ArrayListSequenceReader | Class | org.biojava.nbio.core.sequence.storage | BioJava | |
| BitSequenceReader | An implementation of the popular bit encodings. | Class | org.biojava.nbio.core.sequence.storage | BioJava |
| BitSequenceReader .BitArrayWorker | The logic of working with a bit has been separated out into this class to help developers create the bit data structures without having to | Class | org.biojava.nbio.core.sequence.storage | BioJava |
| FourBitSequenceReader | Four bit encoding of the bit formats. | Class | org.biojava.nbio.core.sequence.storage | BioJava |
| FourBitSequenceReader .FourBitArrayWorker | A four bit per compound implementation of the bit array worker code. | Class | org.biojava.nbio.core.sequence.storage | BioJava |
| JoiningSequenceReader | This reader actually proxies onto multiple types of sequence in order to allow a number of sequence objects to act as if they are one sequence. | Class | org.biojava.nbio.core.sequence.storage | BioJava |
| SequenceAsStringHelper | This is a common method that can be used across multiple storage/proxy implementations to handle Negative strand and other interesting elements of sequence data. | Class | org.biojava.nbio.core.sequence.storage | BioJava |
| SingleCompoundSequenceReader | An implementation of the SequenceReader interface which for every call will return only 1 compound (given to it during construction; a String | Class | org.biojava.nbio.core.sequence.storage | BioJava |
| TwoBitSequenceReader | 0 - T1 - C2 - A3 - G We also do not support case sensitive encodings therefore if you pass a | Class | org.biojava.nbio.core.sequence.storage | BioJava |
| TwoBitSequenceReader .TwoBitArrayWorker | Extension of the BitArrayWorker which provides the 2bit implementation code. | Class | org.biojava.nbio.core.sequence.storage | BioJava |