Name | Description | Type | Package | Framework |
Component | contains information about a certain Component. | Class | org.biojava.nbio.protmod | BioJava |
ComponentXMLConverter | Class | org.biojava.nbio.protmod.io | BioJava | |
ModificationCategory | enum ModificationCategorydefine modification categories. | Class | org.biojava.nbio.protmod | BioJava |
ModificationCondition | Conditions of a protein modification, e. | Interface | org.biojava.nbio.protmod | BioJava |
ModificationConditionImpl | Class | org.biojava.nbio.protmod | BioJava | |
ModificationLinkage | Class | org.biojava.nbio.protmod | BioJava | |
ModificationOccurrenceType | enum ModificationOccurrenceTypeSince:3. | Class | org.biojava.nbio.protmod | BioJava |
ModifiedCompound | Root interface for all modifications in structure. | Interface | org.biojava.nbio.protmod.structure | BioJava |
ModifiedCompoundImpl | Class | org.biojava.nbio.protmod.structure | BioJava | |
ModifiedCompoundXMLConverter | Class | org.biojava.nbio.protmod.io | BioJava | |
ProteinModification | This interface defines information about a specific proteinSince:3. | Interface | org.biojava.nbio.protmod | BioJava |
ProteinModificationIdentifier | Identify attachment modification in a 3-D structure. | Class | org.biojava.nbio.protmod.structure | BioJava |
ProteinModificationImpl | This class contains information about a specific proteinSince:3. | Class | org.biojava.nbio.protmod | BioJava |
ProteinModificationImpl .Builder | Uses Builder pattern to build a ProteinModification. | Class | org.biojava.nbio.protmod | BioJava |
ProteinModificationRegistry | This class serves as a instance registry by maintaining a pool of ProteinModification instances. | Class | org.biojava.nbio.protmod | BioJava |
ProteinModificationXmlReader | Class | org.biojava.nbio.protmod.io | BioJava | |
StructureAtom | Everything that is needed to uniquely describe a atom. | Class | org.biojava.nbio.protmod.structure | BioJava |
StructureAtomLinkage | Class | org.biojava.nbio.protmod.structure | BioJava | |
StructureAtomXMLConverter | Class | org.biojava.nbio.protmod.io | BioJava | |
StructureGroup | Information of a group (residue or ligand) involved in a modification. | Class | org.biojava.nbio.protmod.structure | BioJava |
StructureGroupXMLConverter | Class | org.biojava.nbio.protmod.io | BioJava | |
StructureUtil | Class | org.biojava.nbio.protmod.structure | BioJava | |