Search Java Classes and Packages
#Org.biojava.nbio.structure.align Classes and Interfaces - 186 results found.
| Name | Description | Type | Package | Framework |
| AboutDialog | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| AbstractAlignmentJmol | An Abstract Class to generalize the visualization of AFP and MultipleAlignment structure alignments in Jmol. | Class | org.biojava.nbio.structure.align.gui.jmol | BioJava |
| AbstractScoresCache | Abstact implementation of the ScoresCache with the shared code used in all objects with a variables cache. | Class | org.biojava.nbio.structure.align.multiple | BioJava |
| AbstractStructureAlignment | Class | org.biojava.nbio.structure.align | BioJava | |
| AbstractUserArgumentProcessor | Base class for a new structure alignment CLI. | Class | org.biojava.nbio.structure.align.ce | BioJava |
| AFP | A class to represent a FATCAT AFPAuthor:Andreas PrlicSee Also:Serialized Form | Class | org.biojava.nbio.structure.align.model | BioJava |
| AFPAlignmentDisplay | Class | org.biojava.nbio.structure.align.util | BioJava | |
| AFPCalculator | a class that performs calculations on AFPCHainsAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.fatcat.calc | BioJava |
| AFPChain | A bean to contain the core of a structure alignment. | Class | org.biojava.nbio.structure.align.model | BioJava |
| AFPChainCoordManager | Class | org.biojava.nbio.structure.align.gui.aligpanel | BioJava | |
| AFPChainer | a class to chain AFPs to an alignmentAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.fatcat.calc | BioJava |
| AFPChainFlipper | Class | org.biojava.nbio.structure.align.xml | BioJava | |
| AFPChainScorer | Class | org.biojava.nbio.structure.align.util | BioJava | |
| AfpChainWriter | A class to convert the data in an AfpChain object to various String outputs. | Class | org.biojava.nbio.structure.align.model | BioJava |
| AFPChainXMLConverter | Class | org.biojava.nbio.structure.align.xml | BioJava | |
| AFPChainXMLParser | Class | org.biojava.nbio.structure.align.xml | BioJava | |
| AFPOptimizer | Class | org.biojava.nbio.structure.align.fatcat.calc | BioJava | |
| AFPPostProcessor | does post processing after alignment chainginAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.fatcat.calc | BioJava |
| AFPTwister | Class | org.biojava.nbio.structure.align | BioJava | |
| AligMatEl | Class | org.biojava.nbio.structure.align.helper | BioJava | |
| Alignable | Interface | org.biojava.nbio.structure.align.pairwise | BioJava | |
| AlignmentCalc | A class that obtains two structures via DAS and aligns them This is done in a separate thread. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| AlignmentCalcDB | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| AlignmentCalculationRunnable | Interface | org.biojava.nbio.structure.align.gui | BioJava | |
| AlignmentGui | A JFrame that allows to trigger a pairwise structure alignment, either from files in a directory, | Class | org.biojava.nbio.structure.align.gui | BioJava |
| AlignmentProgressListener | Interface | org.biojava.nbio.structure.align.events | BioJava | |
| AlignmentProgressListener | Class | org.biojava.nbio.structure.align.pairwise | BioJava | |
| AlignmentResult | A class to track the alignment results in a flat fileAuthor:andreasSee Also:Serialized Form | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| AlignmentTextPanel | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| AlignmentTools | Methods for analyzing and manipulating AFPChains and for other pairwise alignment utilities. | Class | org.biojava.nbio.structure.align.util | BioJava |
| AlignmentTools .IdentityMap | A Map can be viewed as a function from K to V. | Class | org.biojava.nbio.structure.align.util | BioJava |
| AligNPE | Class | org.biojava.nbio.structure.align.pairwise | BioJava | |
| AlignTools | Class | org.biojava.nbio.structure.align.helper | BioJava | |
| AligPanel | A JPanel that can display an AFPChain in a nice way and interact with Jmol. | Class | org.biojava.nbio.structure.align.gui.aligpanel | BioJava |
| AligPanelMouseMotionListener | Class | org.biojava.nbio.structure.align.gui.aligpanel | BioJava | |
| AligUIManager | Class | org.biojava.nbio.structure.align.webstart | BioJava | |
| AltAligComparator | a comparator to sort AlternativeAlignments based on their number of equivalent residuesAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| AlternativeAlignment | Alternative alignments arise from different seed alignments or seed FPairs. | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| AtomCache | A utility class that provides easy access to Structure objects. | Class | org.biojava.nbio.structure.align.util | BioJava |
| AtomInfo | This class uniquely describes an atomAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.gui.jmol | BioJava |
| AtomInfoParser | Class | org.biojava.nbio.structure.align.gui.jmol | BioJava | |
| AutoSuggestProvider | Interface | org.biojava.nbio.structure.align.gui.autosuggest | BioJava | |
| BioJavaStructureAlignment | Wrapper for the BioJava Structure Alignment ImplementationAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align | BioJava |
| Block | A Block is a Data Structure that stores aligned positions of a MultipleAlignment with the condition that residues are in a | Interface | org.biojava.nbio.structure.align.multiple | BioJava |
| BlockImpl | General implementation of a Block that supports any type of sequential alignment with gaps. | Class | org.biojava.nbio.structure.align.multiple | BioJava |
| BlockSet | A BlockSet is a Data Structure to store a flexible alignment part of a multiple alignment. | Interface | org.biojava.nbio.structure.align.multiple | BioJava |
| BlockSetImpl | A general implementation of a BlockSet to store a flexible part of a multiple alignment. | Class | org.biojava.nbio.structure.align.multiple | BioJava |
| BrowserOpener | Class | org.biojava.nbio.structure.align.webstart | BioJava | |
| CacheFactory | provides a SoftHashMap singleton. | Class | org.biojava.nbio.structure.align.util | BioJava |
| CallableStructureAlignment | Class | org.biojava.nbio.structure.align | BioJava | |
| CECalculator | This is based on the original Combinatorial Extension (CE) source code from 2003 or 2004 (CE version 2. | Class | org.biojava.nbio.structure.align.ce | BioJava |
| CeCalculatorEnhanced | This is based on the original Combinatorial Extension (CE) source code from 2003 or 2004 (CE version 2. | Class | org.biojava.nbio.structure.align.ce | BioJava |
| CeCPMain | A wrapper for CeMain which sets default parameters to be appropriate for finding circular permutations. | Class | org.biojava.nbio.structure.align.ce | BioJava |
| CeCPMain .CPRange | Tiny wrapper for the disallowed regions of an alignment. | Class | org.biojava.nbio.structure.align.ce | BioJava |
| CECPParameters | Provides parameters to CeCPMainAuthor:Spencer Bliven | Class | org.biojava.nbio.structure.align.ce | BioJava |
| CECPParameters .DuplicationHint | Class | org.biojava.nbio.structure.align.ce | BioJava | |
| CeCPUserArgumentProcessor | Class | org.biojava.nbio.structure.align.ce | BioJava | |
| CeMain | The main class of the Java implementation of the Combinatorial Extension Algorithm (CE), as has been originally developed by I. | Class | org.biojava.nbio.structure.align.ce | BioJava |
| CeParameters | Contains the parameters that can be sent to CEAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.ce | BioJava |
| CeParameters .ScoringStrategy | Class | org.biojava.nbio.structure.align.ce | BioJava | |
| CeSideChainMain | Class | org.biojava.nbio.structure.align.ce | BioJava | |
| CeSideChainUserArgumentProcessor | Class | org.biojava.nbio.structure.align.ce | BioJava | |
| CeUserArgumentProcessor | process the arguments from command lineAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.ce | BioJava |
| CeUserArgumentProcessor .CeStartupParams | Class | org.biojava.nbio.structure.align.ce | BioJava | |
| ChooseDirAction | Ask the user to provide a directory containting PDB files. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| CliTools | Utilities for autoconfiguring javabeans based on command line arguments. | Class | org.biojava.nbio.structure.align.util | BioJava |
| ClusterAltAligs | A class that clusters alternative alignments according to theirSince:1. | Class | org.biojava.nbio.structure.align | BioJava |
| CollectionTools | Utilities for working with collections. | Class | org.biojava.nbio.structure.align.util | BioJava |
| ConfigPDBInstallPanel | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| ConfigStrucAligParams | Interface | org.biojava.nbio.structure.align.ce | BioJava | |
| ConfigurationException | Class | org.biojava.nbio.structure.align.util | BioJava | |
| ConfigXMLHandler | Class | org.biojava.nbio.structure.align.webstart | BioJava | |
| CoreSuperimposer | Superimposes the core aligned residues of every structure in a MultipleAlignment onto a reference structure. | Class | org.biojava.nbio.structure.align.multiple.util | BioJava |
| CountProgressListener | Class | org.biojava.nbio.structure.align.client | BioJava | |
| DBResultTable | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| DBSearchGUI | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| DefaultAutoSuggestProvider | Class | org.biojava.nbio.structure.align.gui.autosuggest | BioJava | |
| DisplayAFP | A utility class for visualistion of structure alignmentsAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.gui | BioJava |
| DotPlotPanel | Displays the dot plot trace for an alignment. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| FarmJob | A job as it can be run on the farm. | Class | org.biojava.nbio.structure.align | BioJava |
| FarmJobParameters | Class | org.biojava.nbio.structure.align.client | BioJava | |
| FarmJobRunnable | Contains the single thread for a job that can run multiple alignments. | Class | org.biojava.nbio.structure.align.client | BioJava |
| FatCat | Class | org.biojava.nbio.structure.align.fatcat | BioJava | |
| FatCatAligner | A class that does calculations on an AFPChainAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.fatcat.calc | BioJava |
| FatCatFlexible | Class | org.biojava.nbio.structure.align.fatcat | BioJava | |
| FatCatParameters | Class | org.biojava.nbio.structure.align.fatcat.calc | BioJava | |
| FatCatRigid | Class | org.biojava.nbio.structure.align.fatcat | BioJava | |
| FatCatUserArgumentProcessor | Class | org.biojava.nbio.structure.align.fatcat | BioJava | |
| FCAlignHelper | Class | org.biojava.nbio.structure.align.fatcat.calc | BioJava | |
| FragmentJoiner | Joins the initial Fragments together to larger FragmentsSince:1. | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| FragmentPair | a pair of fragments of two protein structuresSince:1. | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| GapArray | Class | org.biojava.nbio.structure.align.helper | BioJava | |
| Gotoh | a class to perform Gotoh algorithmSince:10:56:53 AMVersion:%I% %G%Author:Andreas Prlic (Java), Peter Lackner (original C code) | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| GUIAlignmentProgressListener | a GUI that allows to watch progress as multiple alignments are being processed. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| GUIFarmJobRunnable | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| GuiWrapper | A class to wrap some of the strucutre. | Class | org.biojava.nbio.structure.align.ce | BioJava |
| HasResultXMLConverter | Class | org.biojava.nbio.structure.align.xml | BioJava | |
| HelpDialog | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| HTTPConnectionTools | a class that takes care about opening HttpURLConnections and sets the proper timeoutsSince:9:58:25 AMVersion:%I% %G%Author:Andreas Prlic | Class | org.biojava.nbio.structure.align.util | BioJava |
| IdxComparator | Class | org.biojava.nbio.structure.align.helper | BioJava | |
| IndexPair | Class | org.biojava.nbio.structure.align.helper | BioJava | |
| JAutoSuggest | A JTextField that can make suggestions for auto-complete. | Class | org.biojava.nbio.structure.align.gui.autosuggest | BioJava |
| JFatCatClient | Class | org.biojava.nbio.structure.align.client | BioJava | |
| JmolPanel | Class | org.biojava.nbio.structure.align.gui.jmol | BioJava | |
| JmolTools | Class | org.biojava.nbio.structure.align.gui.jmol | BioJava | |
| JNLPProxy | Class | org.biojava.nbio.structure.align.webstart | BioJava | |
| JobKillException | Class | org.biojava.nbio.structure.align.client | BioJava | |
| JointFragments | A utility class that defines which set of atoms are considered to be on equivalent positions. | Class | org.biojava.nbio.structure.align.helper | BioJava |
| JPrintPanel | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| MatrixListener | Interface | org.biojava.nbio.structure.align.ce | BioJava | |
| MemoryMonitor | Tracks Memory allocated & used, displayed in graph form. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| MenuCreator | Create the menus for structure alignment GUI windows (JFrames). | Class | org.biojava.nbio.structure.align.gui | BioJava |
| MenuCreator .DotPlotListener | Creates a frame to display a DotPlotPanel. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| MultipleAlignment | A MultipleAlignment is a Data Structure to store the core information of a multiple structure alignment, as a return type. | Interface | org.biojava.nbio.structure.align.multiple | BioJava |
| MultipleAlignmentCalc | A class that obtains structures via DAS and aligns them. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| MultipleAlignmentCoordManager | Generalization of the Coodinate Manager to include an arbitrary number of sequences (lines) for MultipleAlignment visualization. | Class | org.biojava.nbio.structure.align.gui.aligpanel | BioJava |
| MultipleAlignmentDisplay | Utility functions to generalize the visualization of MultipleAlignments in molecular viewers. | Class | org.biojava.nbio.structure.align.multiple.util | BioJava |
| MultipleAlignmentEnsemble | A MultipleAlignmentEnsemble is a collection of MultipleAlignments that share the same structures (Atoms) and creation properties (algorithm, | Interface | org.biojava.nbio.structure.align.multiple | BioJava |
| MultipleAlignmentEnsembleImpl | A general implementation of a MultipleAlignmentEnsemble. | Class | org.biojava.nbio.structure.align.multiple | BioJava |
| MultipleAlignmentGUI | A JFrame that allows to trigger a multiple structure alignment, either from files in a directory or after manual upload. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| MultipleAlignmentImpl | A general implementation of a MultipleAlignment. | Class | org.biojava.nbio.structure.align.multiple | BioJava |
| MultipleAlignmentJmol | A class that provides a 3D visualization Frame in Jmol for MultipleAlignments. | Class | org.biojava.nbio.structure.align.gui.jmol | BioJava |
| MultipleAlignmentJmolDisplay | Utility Class that provides helper methods for the visualization of MultipleAlignments. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| MultipleAlignmentScorer | Utility class for calculating common scores of MultipleAlignments. | Class | org.biojava.nbio.structure.align.multiple.util | BioJava |
| MultipleAlignmentTools | Utility functions for working with MultipleAlignment. | Class | org.biojava.nbio.structure.align.multiple.util | BioJava |
| MultipleAlignmentWriter | This class contains functions for the conversion of MultipleAlignment to various String outputs. | Class | org.biojava.nbio.structure.align.multiple.util | BioJava |
| MultipleAlignmentXMLConverter | Helper methods to convert all the hierarchy levels of a MultipleAlignment into an XML format. | Class | org.biojava.nbio.structure.align.xml | BioJava |
| MultipleAlignmentXMLParser | Parse an XML file representing a MultipleAlignmentEnsemble, so that the original alignment can be recovered. | Class | org.biojava.nbio.structure.align.xml | BioJava |
| MultipleAligPanel | A JPanel that can display the sequence alignment of a MultipleAlignment in a nice way and interact with Jmol by | Class | org.biojava.nbio.structure.align.gui.aligpanel | BioJava |
| MultipleAligPanelMouseMotionListener | Mouse Motion Listener for the MultipleAligPanel, which provides methods to obtain positions of the mouse | Class | org.biojava.nbio.structure.align.gui.aligpanel | BioJava |
| MultipleMcMain | Main class of the Java implementation of the Combinatorial Extension - Monte Carlo (CEMC) Algorithm, | Class | org.biojava.nbio.structure.align.multiple.mc | BioJava |
| MultipleMcOptimizer | This class takes a MultipleAlignment seed previously generated and runs a Monte Carlo optimization in order to improve the overall score and highlight | Class | org.biojava.nbio.structure.align.multiple.mc | BioJava |
| MultipleMcParameters | Contains the parameters to be sent to the MC optimization. | Class | org.biojava.nbio.structure.align.multiple.mc | BioJava |
| MultipleStatusDisplay | This class provides information of the selected positions in the It has to be linked to a MultipleAligPanel in order to obtain | Class | org.biojava.nbio.structure.align.gui.aligpanel | BioJava |
| MultipleStructureAligner | Interface for the Multiple Structure Alignment Algorithms. | Interface | org.biojava.nbio.structure.align | BioJava |
| MultipleSuperimposer | Interface for Multiple Alignment superposition algorithms. | Interface | org.biojava.nbio.structure.align.multiple.util | BioJava |
| MultiThreadedDBSearch | Performs a multi threaded database search for an input protein structureAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align | BioJava |
| MyAlignmentLoadListener | Loads an alignment in an XML format and displays its content in a new Jmol panel. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| MyDistMaxListener | Shows the interatomic Distance Matrices of all the Structures aligned in different Frames. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| MyExportListener | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| MyJmolStatusListener | Class | org.biojava.nbio.structure.align.gui.jmol | BioJava | |
| MyOpenPdbFileListener | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| MySaveFileListener | Save an alignment to a specified File by the user. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| MyTableRowSorter | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| OptimalCECPMain | A wrapper for CeMain which sets default parameters to be appropriate for finding circular permutations. | Class | org.biojava.nbio.structure.align.ce | BioJava |
| OptimalCECPParameters | Contains the parameters that can be sent to CEAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.ce | BioJava |
| ParameterGUI | UI for ConfigStrucAligParams, for the AlignmentGUI. | Class | org.biojava.nbio.structure.align.gui | BioJava |
| PdbPair | A pair for structure alignmentAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.client | BioJava |
| PdbPairsMessage | Class | org.biojava.nbio.structure.align.xml | BioJava | |
| PdbPairXMLConverter | Class | org.biojava.nbio.structure.align.xml | BioJava | |
| PersistentConfig | a class to store the config using the Java Web StartAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.webstart | BioJava |
| PositionInQueueXMLConverter | Class | org.biojava.nbio.structure.align.xml | BioJava | |
| RasmolCommandListener | a utility class that listens to Ramsol script commands in the @link BiojavaJmol classAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.gui.jmol | BioJava |
| ReferenceSuperimposer | Superimposes each structure in a MultipleAlignment onto a reference Performs a global superposition of the MultipleAlignment in case | Class | org.biojava.nbio.structure.align.multiple.util | BioJava |
| RepresentativeXMLConverter | Class | org.biojava.nbio.structure.align.xml | BioJava | |
| ResourceManager | A class that manages the Strings that are defined in the spice. | Class | org.biojava.nbio.structure.align.util | BioJava |
| RotationAxis | Calculates the rotation axis for an alignment A superposition of two structures is generally represented as a rotation | Class | org.biojava.nbio.structure.align.util | BioJava |
| SCOPAutoSuggestProvider | Class | org.biojava.nbio.structure.align.gui.autosuggest | BioJava | |
| ScoresCache | Interface for classes which implement a temporary cache for various numeric scores, e. | Interface | org.biojava.nbio.structure.align.multiple | BioJava |
| SelectPDBPanel | A Panel that allows user to specify PDB & chain ID, as well as sub-rangesAuthor:AndreasSee Also:Serialized Form | Class | org.biojava.nbio.structure.align.gui | BioJava |
| ShowPDBIDListener | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| SigEva | Class | org.biojava.nbio.structure.align.fatcat.calc | BioJava | |
| SmithWaterman3Daligner | provides a 3D superimposition based on the sequence alignmentAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.seq | BioJava |
| SmithWaterman3DParameters | Class | org.biojava.nbio.structure.align.seq | BioJava | |
| SmithWatermanUserArgumentProcessor | Class | org.biojava.nbio.structure.align.seq | BioJava | |
| SmithWatermanUserArgumentProcessor .SmithWatermanStartupParams | Class | org.biojava.nbio.structure.align.seq | BioJava | |
| StartupParameters | a simple bean that contains the parameters that can get set at startupAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.ce | BioJava |
| StatusDisplay | Class | org.biojava.nbio.structure.align.gui.aligpanel | BioJava | |
| StrCompAlignment | Class | org.biojava.nbio.structure.align.pairwise | BioJava | |
| StrucAligParameters | A class that contains all the parameters of the structure alignment algorithm. | Class | org.biojava.nbio.structure.align | BioJava |
| StructureAlignment | Interface | org.biojava.nbio.structure.align | BioJava | |
| StructureAlignmentDisplay | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| StructureAlignmentFactory | Class | org.biojava.nbio.structure.align | BioJava | |
| StructureAlignmentJmol | A class that provides a simple GUI for JmolSince:1. | Class | org.biojava.nbio.structure.align.gui.jmol | BioJava |
| StructureAlignmentOptimizer | Class | org.biojava.nbio.structure.align.fatcat.calc | BioJava | |
| StructureLoaderThread | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| StructureName | A utility class that makes working with names of structures, domains and ranges easier. | Class | org.biojava.nbio.structure.align.client | BioJava |
| StructureName .Source | Class | org.biojava.nbio.structure.align.client | BioJava | |
| StructurePairAligner | Perform a pairwise protein structure superimposition. | Class | org.biojava.nbio.structure.align | BioJava |
| SynchronizedOutFile | Class | org.biojava.nbio.structure.align.util | BioJava | |
| SystemInfo | Class | org.biojava.nbio.structure.align.gui | BioJava | |
| UserArgumentProcessor | Interface | org.biojava.nbio.structure.align.ce | BioJava | |
| UserConfiguration | A container to persist config to the file systemAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.util | BioJava |
| WebStartDBSearch | A Web Start wrapper for a FarmJobRunnable. | Class | org.biojava.nbio.structure.align.webstart | BioJava |
| WebStartDBSearchResults | Class | org.biojava.nbio.structure.align.webstart | BioJava | |
| WebStartMain | Class | org.biojava.nbio.structure.align.webstart | BioJava | |