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#Org.biojava.nbio.structure.align.pairwise Classes and Interfaces - 10 results found.
| Name | Description | Type | Package | Framework |
| Alignable | Interface | org.biojava.nbio.structure.align.pairwise | BioJava | |
| AlignmentProgressListener | Class | org.biojava.nbio.structure.align.pairwise | BioJava | |
| AlignmentResult | A class to track the alignment results in a flat fileAuthor:andreasSee Also:Serialized Form | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| AligNPE | Class | org.biojava.nbio.structure.align.pairwise | BioJava | |
| AltAligComparator | a comparator to sort AlternativeAlignments based on their number of equivalent residuesAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| AlternativeAlignment | Alternative alignments arise from different seed alignments or seed FPairs. | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| FragmentJoiner | Joins the initial Fragments together to larger FragmentsSince:1. | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| FragmentPair | a pair of fragments of two protein structuresSince:1. | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| Gotoh | a class to perform Gotoh algorithmSince:10:56:53 AMVersion:%I% %G%Author:Andreas Prlic (Java), Peter Lackner (original C code) | Class | org.biojava.nbio.structure.align.pairwise | BioJava |
| StrCompAlignment | Class | org.biojava.nbio.structure.align.pairwise | BioJava | |