Search Java Classes and Packages
#Org.biojava.nbio.structure.domain Classes and Interfaces - 22 results found.
| Name | Description | Type | Package | Framework |
| AssignmentXMLSerializer | Class | org.biojava.nbio.structure.domain | BioJava | |
| ClusterDomains | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |
| Cut | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |
| CutDomain | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |
| CutSites | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |
| CutValues | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |
| Domain | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |
| DomainProvider | Interface | org.biojava.nbio.structure.domain | BioJava | |
| DomainProviderFactory | Class | org.biojava.nbio.structure.domain | BioJava | |
| GetDistanceMatrix | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |
| LocalProteinDomainParser | Protein Domain Parser is a an algorithm that attempts at assigning domains for 3D protein structures. | Class | org.biojava.nbio.structure.domain | BioJava |
| PDBDomainProvider | Class to fetch domains through the RCSB's REST API. | Class | org.biojava.nbio.structure.domain | BioJava |
| PDPDistanceMatrix | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |
| PDPDomain | Class | org.biojava.nbio.structure.domain | BioJava | |
| PDPParameters | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |
| PDPProvider | Decomposes a structure into representative PDP domains. | Interface | org.biojava.nbio.structure.domain | BioJava |
| RemoteDomainProvider | A DomainProvider that uses a mixture of SCOP and PDP domains. | Class | org.biojava.nbio.structure.domain | BioJava |
| RemotePDPProvider | A class that provided PDP assignments that are loaded from a remote web serverAuthor:Andreas Prlic | Class | org.biojava.nbio.structure.domain | BioJava |
| Segment | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |
| SegmentComparator | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |
| SerializableCache | A class that provides all that is necessary to create a Serializable CacheSince:3. | Class | org.biojava.nbio.structure.domain | BioJava |
| ShortSegmentRemover | Class | org.biojava.nbio.structure.domain.pdp | BioJava | |