| Name | Description | Type | Package | Framework |
| DistanceBox | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| IcosahedralSampler | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| Icosahedron | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| MomentsOfInertia | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| MomentsOfInertia .SymmetryClass | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| Octahedron | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| Polyhedron | Interface | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| Prism | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| RectangularPrism | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| SphereSampler | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| SuperPosition | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| SuperPositionQCP | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |
| Tetrahedron | Class | org.biojava.nbio.structure.symmetry.geometry | BioJava | |