| Name | Description | Type | Package | Framework |
| BasicQuery | Provides basic functionality for a Bayesian query. | Class | org.encog.ml.bayesian.query | HeatonReasearch |
| BayesEstimator | An estimator is used during Bayesian training to determine optimal probability values. | Interface | org.encog.ml.bayesian.training.estimator | HeatonReasearch |
| BayesianChoice | A choice in a Bayesian network. | Class | org.encog.ml.bayesian | HeatonReasearch |
| BayesianError | Thrown when an error occurs working with Bayesian networks. | Class | org.encog.ml.bayesian | HeatonReasearch |
| BayesianEvent | Events make up a Bayesian network. | Class | org.encog.ml.bayesian | HeatonReasearch |
| BayesianInit | The method by which a Bayesian network should be initialized. | Class | org.encog.ml.bayesian.training | HeatonReasearch |
| BayesianQuery | A Bayesian query. | Interface | org.encog.ml.bayesian.query | HeatonReasearch |
| BayesianTable | Holds a Bayesian truth table. | Class | org.encog.ml.bayesian.table | HeatonReasearch |
| BayesSearch | Search for a good Bayes structure. | Interface | org.encog.ml.bayesian.training.search.k2 | HeatonReasearch |
| BIFDefinition | Holds a BIF definition. | Class | org.encog.ml.bayesian.bif | HeatonReasearch |
| BIFHandler | Handler, used to parse the XML BIF files. | Class | org.encog.ml.bayesian.bif | HeatonReasearch |
| BIFUtil | A utility class to read and write Bayesian networks in BIF format. | Class | org.encog.ml.bayesian.bif | HeatonReasearch |
| BIFVariable | Class | org.encog.ml.bayesian.bif | HeatonReasearch | |
| EnumerationQuery | An enumeration query allows probabilistic queries on a Bayesian network. | Class | org.encog.ml.bayesian.query.enumerate | HeatonReasearch |
| EstimatorNone | A simple estimator that does nothing. | Class | org.encog.ml.bayesian.training.estimator | HeatonReasearch |
| EventState | Holds the state of an event during a query. | Class | org.encog.ml.bayesian.query.sample | HeatonReasearch |
| EventType | The type of event for a Bayesian Network. | Class | org.encog.ml.bayesian | HeatonReasearch |
| FileSection | The section of the BIF file that we are currently in. | Class | org.encog.ml.bayesian.bif | HeatonReasearch |
| ParsedChoice | Class | org.encog.ml.bayesian.parse | HeatonReasearch | |
| ParsedEvent | Class | org.encog.ml.bayesian.parse | HeatonReasearch | |
| ParsedProbability | A probability that has been parsed. | Class | org.encog.ml.bayesian.parse | HeatonReasearch |
| ParseProbability | Used to parse probability strings for the Bayes networks. | Class | org.encog.ml.bayesian.parse | HeatonReasearch |
| PersistBayes | Persist a Bayesian network. | Class | org.encog.ml.bayesian | HeatonReasearch |
| SamplingQuery | A sampling query allows probabilistic queries on a Bayesian network. | Class | org.encog.ml.bayesian.query.sample | HeatonReasearch |
| SearchK2 | Search for optimal Bayes structure with K2. | Class | org.encog.ml.bayesian.training.search.k2 | HeatonReasearch |
| SearchNone | Simple class to perform no search for optimal network structure. | Class | org.encog.ml.bayesian.training.search | HeatonReasearch |
| SimpleEstimator | A simple probability estimator. | Class | org.encog.ml.bayesian.training.estimator | HeatonReasearch |
| TableLine | A line from a Bayesian truth table. | Class | org.encog.ml.bayesian.table | HeatonReasearch |
| TrainBayesian | Train a Bayesian network. | Class | org.encog.ml.bayesian.training | HeatonReasearch |