Search Java Classes and Packages
#Org.openscience.cdk.graph Classes and Interfaces - 28 results found.
| Name | Description | Type | Package | Framework |
| AdjacencyMatrix | Calculator for a adjacency matrix representation of this AtomContainer. | Class | org.openscience.cdk.graph.matrix | CDK |
| AtomContainerAtomPermutor | This class iterates through all possible permutations of the atom order in a given atom container. | Class | org.openscience.cdk.graph | CDK |
| AtomContainerBondPermutor | This class allows to iterate trough the set of all possible permutations of the bond order in a given atom container. | Class | org.openscience.cdk.graph | CDK |
| AtomContainerPermutor | The permutation code here is based on a pseudo code example on a tutorial site created and maintained by Phillip P. | Class | org.openscience.cdk.graph | CDK |
| BadMatrixFormatException | Class | org.openscience.cdk.graph.invariant.exception | CDK | |
| BFSShortestPath | Utility class that finds the shortest bond path between two atoms using a breadth first search. | Class | org.openscience.cdk.graph | CDK |
| BiconnectivityInspector | Finds the biconnected components of a graph. | Class | org.openscience.cdk.graph | CDK |
| Bspt | BSP-Tree stands for Binary Space Partitioning Tree. | Class | org.openscience.cdk.graph.rebond | CDK |
| Bspt .Tuple | Interface | org.openscience.cdk.graph.rebond | CDK | |
| CanonicalLabeler | Canonically labels an atom container implementing the algorithm published in David Weininger et. | Class | org.openscience.cdk.graph.invariant | CDK |
| ConjugatedPiSystemsDetector | Class | org.openscience.cdk.graph.invariant | CDK | |
| ConnectionMatrix | Calculator for a connection matrix representation of this AtomContainer. | Class | org.openscience.cdk.graph.matrix | CDK |
| ConnectivityChecker | Tool class for checking whether the (sub)structure in an AtomContainer is connected. | Class | org.openscience.cdk.graph | CDK |
| EquivalentClassPartitioner | An algorithm for topological symmetry. | Class | org.openscience.cdk.graph.invariant | CDK |
| GIMatrix | This class is intended to provide the user an efficient way of implementing matrix of double number and using normal operations (linear operations, addition, substraction, multiplication, inversion, concatenation) | Class | org.openscience.cdk.graph.invariant | CDK |
| HuLuIndexTool | Class | org.openscience.cdk.graph.invariant | CDK | |
| IGraphMatrix | Interface | org.openscience.cdk.graph.matrix | CDK | |
| InChINumbersTools | Tool for calculating atom numbers using the InChI algorithm. | Class | org.openscience.cdk.graph.invariant | CDK |
| IndexOutOfBoundsException | Class | org.openscience.cdk.graph.invariant.exception | CDK | |
| MatrixNotInvertibleException | Class | org.openscience.cdk.graph.invariant.exception | CDK | |
| MinimalPathIterator | Iterates over all shortest paths between two vertices in an undirected, unweighted graph. | Class | org.openscience.cdk.graph | CDK |
| MoleculeGraphs | Utility class to create a molecule graph for use with JGraphT. | Class | org.openscience.cdk.graph | CDK |
| MorganNumbersTools | Tool for calculating Morgan numbers . | Class | org.openscience.cdk.graph.invariant | CDK |
| PathTools | Tools class with methods for handling molecular graphs. | Class | org.openscience.cdk.graph | CDK |
| Point | Class | org.openscience.cdk.graph.rebond | CDK | |
| RebondTool | Provides tools to rebond a molecule from 3D coordinates only. | Class | org.openscience.cdk.graph.rebond | CDK |
| SpanningTree | Spanning tree of a molecule. | Class | org.openscience.cdk.graph | CDK |
| TopologicalMatrix | Calculator for a topological matrix representation of this AtomContainer. | Class | org.openscience.cdk.graph.matrix | CDK |