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#Org.openscience.cdk.interfaces Classes and Interfaces - 51 results found.
NameDescriptionTypePackageFramework
IAdductFormulaClass defining an adduct object in a MolecularFormula.Interfaceorg.openscience.cdk.interfacesCDK
IAminoAcidA AminoAcid is Monomer which stores additional amino acid specific informations, like the N-terminus atom.Interfaceorg.openscience.cdk.interfacesCDK
IAtomRepresents the idea of an chemical atom.Interfaceorg.openscience.cdk.interfacesCDK
IAtomContainerBase class for all chemical objects that maintain a list of Atoms and ElectronContainers.Interfaceorg.openscience.cdk.interfacesCDK
IAtomContainerSetA set of AtomContainers.Interfaceorg.openscience.cdk.interfacesCDK
IAtomParityRepresents the concept of an atom parity identifying the stereochemistry around an atom, given four neighbouring atoms.Interfaceorg.openscience.cdk.interfacesCDK
IAtomTypeThe base class for atom types.Interfaceorg.openscience.cdk.interfacesCDK
IAtomType .HybridizationAn enum for the different hybridization states.Interfaceorg.openscience.cdk.interfacesCDK
IBioPolymerA BioPolymer is a subclass of a Polymer which is supposed to store additional informations about the Polymer which are connected to BioPolymers.Interfaceorg.openscience.cdk.interfacesCDK
IBond considered to be a number of electrons connecting two ore more atoms.Interfaceorg.openscience.cdk.interfacesCDK
IBond .OrderA list of permissible bond orders.Interfaceorg.openscience.cdk.interfacesCDK
IBond .Stereo Stereo type defines not just define the stereochemistry, but also the which atom is the stereo center for which the Stereo is defined.Interfaceorg.openscience.cdk.interfacesCDK
ICDKObjectThe base class for all data objects in this CDK.Interfaceorg.openscience.cdk.interfacesCDK
IChemFileAn IChemObject containing a number of ChemSequences.Interfaceorg.openscience.cdk.interfacesCDK
IChemModelAn object containig multiple MoleculeSet and the other lower level concepts like rings, sequences, Interfaceorg.openscience.cdk.interfacesCDK
IChemObjectThe base class for all chemical objects in this cdk.Interfaceorg.openscience.cdk.interfacesCDK
IChemObjectBuilderInterfaceorg.openscience.cdk.interfacesCDK
IChemObjectChangeEventEvent fired by CDK IChemObject classes to their registered listeners in case something changed within them.Interfaceorg.openscience.cdk.interfacesCDK
IChemObjectListenerClasses implementing this interface must implement this method such that they react appropriately to changes in the object theyInterfaceorg.openscience.cdk.interfacesCDK
IChemSequenceA sequence of ChemModels, which can, for example, be used to store the course of a reaction.Interfaceorg.openscience.cdk.interfacesCDK
ICrystalClass representing a molecular crystal.Interfaceorg.openscience.cdk.interfacesCDK
IDoubleBondStereochemistryStereochemistry specification for double bond stereochemistry.Interfaceorg.openscience.cdk.interfacesCDK
IDoubleBondStereochemistry .ConformationInterfaceorg.openscience.cdk.interfacesCDK
IElectronContainerBase class for entities containing electrons, like bonds, orbitals, lone-pairs.Interfaceorg.openscience.cdk.interfacesCDK
IElementInterfaceorg.openscience.cdk.interfacesCDK
IFragmentAtomClass to represent an IPseudoAtom which embeds an IAtomContainer.Interfaceorg.openscience.cdk.interfacesCDK
IIsotopeUsed to store and retrieve data of a particular isotope.Interfaceorg.openscience.cdk.interfacesCDK
ILonePairA LonePair is an orbital primarily located with one Atom, containingKeywords:orbital, lone-pairInterfaceorg.openscience.cdk.interfacesCDK
IMappingRepresents a mapping of two atoms.Interfaceorg.openscience.cdk.interfacesCDK
IMolecularFormulaClass defining a molecular formula object.Interfaceorg.openscience.cdk.interfacesCDK
IMolecularFormulaSetClass defining a molecular formula object.Interfaceorg.openscience.cdk.interfacesCDK
IMoleculeRepresents a set of Molecules.Interfaceorg.openscience.cdk.interfacesCDK
IMoleculeSetRepresents a set of Molecules.Interfaceorg.openscience.cdk.interfacesCDK
IMonomerA Monomer is an AtomContainer which stores additional monomer specific informations for a group of Atoms.Interfaceorg.openscience.cdk.interfacesCDK
IPDBAtomA PDBAtom is a subclass of a Atom which is supposed to store additional informations about the Atom.Interfaceorg.openscience.cdk.interfacesCDK
IPDBMonomerRepresents the idea of an protein monomer as found in PDB files.Interfaceorg.openscience.cdk.interfacesCDK
IPDBPolymerA PDBPolymer is a subclass of a BioPolymer which is supposed to store additional informations about the BioPolymer which are connected to BioPolymers.Interfaceorg.openscience.cdk.interfacesCDK
IPDBStructureRepresents the idea of an chemical structure.Interfaceorg.openscience.cdk.interfacesCDK
IPolymerSubclass of Molecule to store Polymer specific attributes that a Polymer has.Interfaceorg.openscience.cdk.interfacesCDK
IPseudoAtomRepresents the idea of a non-chemical atom-like entity, like Me, R, X, Phe, His, etc.Interfaceorg.openscience.cdk.interfacesCDK
IReactionRepresents the idea of a chemical reaction.Interfaceorg.openscience.cdk.interfacesCDK
IReaction .DirectionPermissible reaction directions.Interfaceorg.openscience.cdk.interfacesCDK
IReactionSchemeClasses that implement this interface of a scheme.Interfaceorg.openscience.cdk.interfacesCDK
IReactionSetA set of reactions, for example those taking part in a reaction.Interfaceorg.openscience.cdk.interfacesCDK
IRingClass representing a ring structure in a molecule.Interfaceorg.openscience.cdk.interfacesCDK
IRingSetMaintains a set of Ring objects.Interfaceorg.openscience.cdk.interfacesCDK
ISingleElectronA Single Electron is an orbital which is occupied by only one electron.Interfaceorg.openscience.cdk.interfacesCDK
IStereoElementRepresents the concept of a stereo element in the molecule.Interfaceorg.openscience.cdk.interfacesCDK
IStrandA Strand is an AtomContainer which stores additional strand specific informations for a group of Atoms.Interfaceorg.openscience.cdk.interfacesCDK
ITetrahedralChiralityStereochemistry specification for quadrivalent atoms.Interfaceorg.openscience.cdk.interfacesCDK
ITetrahedralChirality .StereoInterfaceorg.openscience.cdk.interfacesCDK