Name | Description | Type | Package | Framework |
AbstractAWTDrawVisitor | Partial implementation of the IDrawVisitor interface for the AWT widget toolkit, allowing molecules to be rendered with toolkits based on | Class | org.openscience.cdk.renderer.visitor | CDK |
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AbstractGeneratorParameter | Abstract class to provide the base functionality for IGeneratorParameter implementations. | Class | org.openscience.cdk.renderer.generators.parameter | CDK |
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AbstractRenderer | The base class for all renderers, handling the core aspects of rendering such as the location of the model in 'model space' and the location on | Class | org.openscience.cdk.renderer | CDK |
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AbstractSelection | An abstract selection of IChemObjects. | Class | org.openscience.cdk.renderer.selection | CDK |
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ArrowElement | IRenderingElement for linear arrows. | Class | org.openscience.cdk.renderer.elements | CDK |
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AtomContainerBoundsGenerator | IGenerator that draws a rectangular around the IAtomContainer. | Class | org.openscience.cdk.renderer.generators | CDK |
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AtomContainerRenderer | A general renderer for IAtomContainers. | Class | org.openscience.cdk.renderer | CDK |
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AtomMassGenerator | IGenerator that can render mass number information of atoms. | Class | org.openscience.cdk.renderer.generators | CDK |
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AtomMassSymbolElement | Rendering element that shows the IAtom mass number information. | Class | org.openscience.cdk.renderer.elements | CDK |
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AtomNumberGenerator | | Class | org.openscience.cdk.renderer.generators | CDK |
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AtomNumberGenerator .AtomColorer | The color scheme by which to color the atom numbers, if the AtomNumberGenerator. | Class | org.openscience.cdk.renderer.generators | CDK |
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AtomNumberGenerator .AtomNumberTextColor | Color to draw the atom numbers with. | Class | org.openscience.cdk.renderer.generators | CDK |
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AtomNumberGenerator .ColorByType | Boolean to indicate of the AtomNumberGenerator. | Class | org.openscience.cdk.renderer.generators | CDK |
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AtomNumberGenerator .Offset | | Class | org.openscience.cdk.renderer.generators | CDK |
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AtomNumberGenerator .WillDrawAtomNumbers | Boolean parameter indicating if atom numbers should be drawn, allowing this feature to be disabled temporarily. | Class | org.openscience.cdk.renderer.generators | CDK |
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AtomSymbolElement | A text element with added information. | Class | org.openscience.cdk.renderer.elements | CDK |
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AverageBondLengthCalculator | Utility class for calculating the average bond length for various IChemObject subtypes : IReaction, IMoleculeSet, IChemModel, and IReactionSet. | Class | org.openscience.cdk.renderer | CDK |
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AWTDrawVisitor | widget toolkit, allowing molecules to be rendered with toolkits based on AWT, like the Java reference graphics platform Swing. | Class | org.openscience.cdk.renderer.visitor | CDK |
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AWTFontManager | AWT-specific font manager. | Class | org.openscience.cdk.renderer.font | CDK |
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BasicAtomGenerator | Generates basic IRenderingElements for atoms in an atom container. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicAtomGenerator .AtomColor | This color is overwritten by the IAtomColorer. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicAtomGenerator .AtomColorer | IAtomColorer used to draw elements. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicAtomGenerator .AtomRadius | Magic number with unknown units that defines the radius around an atom, e. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicAtomGenerator .ColorByType | | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicAtomGenerator .CompactAtom | Boolean parameters that will cause atoms to be drawn as filled shapes when set to true. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicAtomGenerator .CompactShape | Shape to be used when drawing atoms in compact mode, as defined by the BasicAtomGenerator. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicAtomGenerator .KekuleStructure | Determines whether structures should be drawn as Kekule structures, thus giving each carbon element explicitly, instead of not displaying the | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicAtomGenerator .Shape | When atoms are selected or in compact mode, they will be covered by a shape determined by this enumeration. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicAtomGenerator .ShowEndCarbons | Boolean parameters that will show carbons with only one (non-hydrogen) neighbor to be drawn with an element symbol. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicAtomGenerator .ShowExplicitHydrogens | Boolean property that triggers explicit hydrogens to be drawn if set to true. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicBondGenerator | Generator for elements from bonds. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicBondGenerator .BondDistance | The gap between double and triple bond lines on the screen. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicBondGenerator .BondLength | The length on the screen of a typical bond. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicBondGenerator .BondWidth | The width on screen of a bond. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicBondGenerator .DefaultBondColor | The color to draw bonds if not other color is given. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicBondGenerator .TowardsRingCenterProportion | The proportion to move in towards the ring center. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicBondGenerator .WedgeWidth | The width on screen of the fat end of a wedge bond. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicGenerator | Combination generator for basic drawing of molecules. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator | This generator does not create any elements, but acts as a holding place for various generator parameters used by most drawings, such as the zoom, | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .ArrowHeadWidth | The width of the head of arrows. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .BackgroundColor | The background color of the drawn image. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .FitToScreen | If true, the scale is set such that the diagram fills the whole screen. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .FontName | Font to use for text. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .ForegroundColor | The foreground color, with which objects are drawn. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .Margin | Area on each of the four margins to keep empty. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .Scale | The scale is the factor to multiply model coordinates by to convert the coordinates to screen space coordinate, such that the entire structure | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .ShowMoleculeTitle | Determines if the molecule's title is depicted. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .ShowTooltip | Determines if tooltips are to be shown. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .UseAntiAliasing | If set to true, uses anti-aliasing for drawing. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .UsedFontStyle | The font style to use for text. | Class | org.openscience.cdk.renderer.generators | CDK |
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BasicSceneGenerator .ZoomFactor | The zoom factor which is a user oriented parameter allowing the user to zoom in on parts of the molecule. | Class | org.openscience.cdk.renderer.generators | CDK |
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BoundsCalculator | Utility class for calculating the 2D bounding rectangles (bounds) of various IChemObject subtypes - IChemModel, IReactionSet, IReaction, | Class | org.openscience.cdk.renderer | CDK |
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BoundsGenerator | Produce a bounding rectangle for various chem objects. | Class | org.openscience.cdk.renderer.generators | CDK |
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BoundsGenerator .BoundsColor | The color of the box drawn at the bounds of a molecule, molecule set, or reaction. | Class | org.openscience.cdk.renderer.generators | CDK |
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CDK2DAtomColors | Gives a short table of atom colors for 2D display. | Class | org.openscience.cdk.renderer.color | CDK |
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CDKAtomColors | Gives a short table of atom colors for 3D display. | Class | org.openscience.cdk.renderer.color | CDK |
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ChemModelRenderer | A general renderer for IChemModels, IReactions, and IMolecules. | Class | org.openscience.cdk.renderer | CDK |
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Close | Indicates the closing point of the path. | Class | org.openscience.cdk.renderer.elements.path | CDK |
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CPKAtomColors | Colors atoms using CPK color scheme . | Class | org.openscience.cdk.renderer.color | CDK |
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CubicTo | A cubic curve in the path. | Class | org.openscience.cdk.renderer.elements.path | CDK |
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ElementGroup | A group of rendering elements, of any type. | Class | org.openscience.cdk.renderer.elements | CDK |
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ExtendedAtomGenerator | A generator for atoms with mass, charge, etc. | Class | org.openscience.cdk.renderer.generators | CDK |
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ExtendedAtomGenerator .ShowAtomTypeNames | Boolean that indicates if atom type names should be given instead of element symbols. | Class | org.openscience.cdk.renderer.generators | CDK |
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ExtendedAtomGenerator .ShowImplicitHydrogens | Boolean that indicates if implicit hydrogens should be depicted. | Class | org.openscience.cdk.renderer.generators | CDK |
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GeneralPath | A path of rendering elements from the elements. | Class | org.openscience.cdk.renderer.elements | CDK |
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GraphRendererModel | This class handles a set of function for the GraphRendererAuthor:Stephan Michels Created on:2001-07-02 | Class | org.openscience.cdk.renderer | CDK |
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IAtomColorer | Interface to a class for coloring atoms. | Interface | org.openscience.cdk.renderer.color | CDK |
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IChemObjectSelection | | Interface | org.openscience.cdk.renderer.selection | CDK |
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IDrawVisitor | An IDrawVisitor is an IRenderingVisitor that can be customized and knows about fonts and other rendering parameters. | Interface | org.openscience.cdk.renderer.visitor | CDK |
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IFontManager | An interface for managing the drawing of fonts at different zoom levels. | Interface | org.openscience.cdk.renderer.font | CDK |
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IFontManager .FontStyle | Style of the font to use to draw text. | Class | org.openscience.cdk.renderer.font | CDK |
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IGenerator | An IGenerator converts chemical entities into parts of the chemical drawing expressed as IRenderingElements. | Interface | org.openscience.cdk.renderer.generators | CDK |
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IGeneratorParameter | Parameter from some rendering of the 2D diagram. | Interface | org.openscience.cdk.renderer.generators | CDK |
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IRenderer | Interface that all 2D renderers implement. | Interface | org.openscience.cdk.renderer | CDK |
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IRenderingElement | Widget toolkit-independent, abstract definition of something to be drawn. | Interface | org.openscience.cdk.renderer.elements | CDK |
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IRenderingVisitor | An IRenderingVisitor is responsible of converting an abstract chemical drawing into a widget set specific drawing. | Interface | org.openscience.cdk.renderer.elements | CDK |
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JCPAction2D | Superclass of all JChemPaint GUI actionsAuthor:steinbeckSee Also:Serialized Form | Class | org.openscience.cdk.renderer | CDK |
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LineElement | A line between two points. | Class | org.openscience.cdk.renderer.elements | CDK |
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LineElement .LineType | The type of the line. | Class | org.openscience.cdk.renderer.elements | CDK |
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LineTo | A line element in the path. | Class | org.openscience.cdk.renderer.elements.path | CDK |
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LonePairGenerator | Generate the symbols for lone pairs. | Class | org.openscience.cdk.renderer.generators | CDK |
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MappingGenerator | | Class | org.openscience.cdk.renderer.generators | CDK |
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MappingGenerator .AtomAtomMappingLineColor | The width on screen of an atom-atom mapping line. | Class | org.openscience.cdk.renderer.generators | CDK |
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MappingGenerator .MappingLineWidth | The width on screen of an atom-atom mapping line. | Class | org.openscience.cdk.renderer.generators | CDK |
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MappingGenerator .ShowAtomAtomMapping | Boolean by which atom-atom mapping depiction can be temporarily disabled. | Class | org.openscience.cdk.renderer.generators | CDK |
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MoleculeSetRenderer | A general renderer for IChemModels, IReactions, and IMolecules. | Class | org.openscience.cdk.renderer | CDK |
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MoveTo | A MoveTo path element moves the drawing 'pen' without making any lines or curves and is commonly used to start a path or make gaps in the path. | Class | org.openscience.cdk.renderer.elements.path | CDK |
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OvalElement | An oval element (should) have both a width and a height. | Class | org.openscience.cdk.renderer.elements | CDK |
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PartialAtomicChargeColors | Class defining the color which with atoms are colored. | Class | org.openscience.cdk.renderer.color | CDK |
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PathBuilder | Builder class for paths. | Class | org.openscience.cdk.renderer.elements.path | CDK |
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PathElement | | Class | org.openscience.cdk.renderer.elements.path | CDK |
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PathElement | A path composed of points. | Class | org.openscience.cdk.renderer.elements | CDK |
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ProductsBoxGenerator | Generate the symbols for radicals. | Class | org.openscience.cdk.renderer.generators | CDK |
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QuadTo | Make a quadratic curve in the path. | Class | org.openscience.cdk.renderer.elements.path | CDK |
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RadicalGenerator | Generate the symbols for radicals. | Class | org.openscience.cdk.renderer.generators | CDK |
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RasmolColors | Atom coloring following RasMol/Chime Color scheme http://www. | Class | org.openscience.cdk.renderer.color | CDK |
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ReactantsBoxGenerator | Generate the symbols for radicals. | Class | org.openscience.cdk.renderer.generators | CDK |
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ReactionArrowGenerator | Generate the arrow for a reaction. | Class | org.openscience.cdk.renderer.generators | CDK |
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ReactionBoxGenerator | Generate the symbols for radicals. | Class | org.openscience.cdk.renderer.generators | CDK |
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ReactionPlusGenerator | Generate the arrow for a reaction. | Class | org.openscience.cdk.renderer.generators | CDK |
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ReactionRenderer | A general renderer for IChemModels, IReactions, and IMolecules. | Class | org.openscience.cdk.renderer | CDK |
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ReactionSceneGenerator | Generator for general reaction scene components. | Class | org.openscience.cdk.renderer.generators | CDK |
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ReactionSceneGenerator .ArrowHeadWidth | Double which indicates how wide the arrow head is in screen pixels. | Class | org.openscience.cdk.renderer.generators | CDK |
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ReactionSceneGenerator .ShowReactionBoxes | Boolean that indicates if boxes are drawn around the reaction. | Class | org.openscience.cdk.renderer.generators | CDK |
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ReactionSetRenderer | A general renderer for IChemModels, IReactions, and IMolecules. | Class | org.openscience.cdk.renderer | CDK |
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RectangleElement | A rectangle, with width and height. | Class | org.openscience.cdk.renderer.elements | CDK |
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RendererModel | Model for IRenderer that contains settings for drawing objects. | Class | org.openscience.cdk.renderer | CDK |
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RendererModel .ColorHash | The color hash is used to color substructures. | Class | org.openscience.cdk.renderer | CDK |
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RendererModel .ExternalHighlightColor | The color used to highlight external selections. | Class | org.openscience.cdk.renderer | CDK |
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RingElement | | Class | org.openscience.cdk.renderer.elements | CDK |
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RingGenerator | Generates just the aromatic indicators for rings : circles, or light-gray inner bonds, depending on the value of CDKStyleAromaticity. | Class | org.openscience.cdk.renderer.generators | CDK |
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RingGenerator .CDKStyleAromaticity | Depicts aromaticity of rings in the original CDK style. | Class | org.openscience.cdk.renderer.generators | CDK |
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RingGenerator .RingProportion | The proportion of a ring bounds to use to draw the ring. | Class | org.openscience.cdk.renderer.generators | CDK |
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RingGenerator .ShowAromaticity | | Class | org.openscience.cdk.renderer.generators | CDK |
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TextElement | Text element as used in the chemical drawing. | Class | org.openscience.cdk.renderer.elements | CDK |
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TextGroupElement | A group of text elements, particularly the element symbol (eg: "C") surrounded by other annotations such as mass number, charge, etc. | Class | org.openscience.cdk.renderer.elements | CDK |
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TextGroupElement .Position | Compass-point positions for text element annotation children. | Class | org.openscience.cdk.renderer.elements | CDK |
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Type | The type of the path elements. | Class | org.openscience.cdk.renderer.elements.path | CDK |
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WedgeLineElement | A 'wedge' is a triangle aligned along a bond that indicates stereochemistry. | Class | org.openscience.cdk.renderer.elements | CDK |
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WedgeLineElement .Direction | | Class | org.openscience.cdk.renderer.elements | CDK |